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Upgrade to RDF4J 5.x #1145

Closed
Tracked by #4905
reckart opened this issue Jun 25, 2024 · 0 comments
Closed
Tracked by #4905

Upgrade to RDF4J 5.x #1145

reckart opened this issue Jun 25, 2024 · 0 comments

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@reckart
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reckart commented Jun 25, 2024

RDF4J 5.0.0 has been released. owlapi 5.5.0 does not seem to be compatible. E.g. when I try to load an OBO file, I get this error.

java.lang.NoSuchFieldError: VERIFY_DATATYPE_VALUES
	at org.semanticweb.owlapi.rio.RioParserImpl.parseDocumentSource(RioParserImpl.java:174)
	at org.semanticweb.owlapi.rio.RioParserImpl.parse(RioParserImpl.java:134)
	at uk.ac.manchester.cs.owl.owlapi.OWLOntologyFactoryImpl.loadOWLOntology(OWLOntologyFactoryImpl.java:195)
	at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.load(OWLOntologyManagerImpl.java:1105)
	at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.loadOntology(OWLOntologyManagerImpl.java:1055)
	at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.loadOntologyFromOntologyDocument(OWLOntologyManagerImpl.java:1005)
	at uk.ac.manchester.cs.owl.owlapi.OWLOntologyManagerImpl.loadOntologyFromOntologyDocument(OWLOntologyManagerImpl.java:1025)
       ...
@reckart reckart mentioned this issue Jun 25, 2024
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3 tasks
@reckart reckart changed the title Compatibility with RDF4J 5.0.0 Upgrade to RDF4J 5.x Jul 17, 2024
reckart added a commit to reckart/owlapi that referenced this issue Jul 17, 2024
@reckart
Issue owlcs#1145: Upgrade to RDF4J 5.x
3ed7121 
- Upgrade to RDF4J 5.0.1
- Fix issues preventing compilation
- Remove redundant/outdated dependency declarations in distribution modules
- Enhanced TestBase to allow printing the document at the start and end of the round trip
hmottestad added a commit to reckart/owlapi that referenced this issue Aug 2, 2024
@hmottestad
owlcsGH-1145 update to RDF4J 5.0.2 and disable test case for handling…
48573ff 
… of invalid json-ld
hmottestad added a commit to reckart/owlapi that referenced this issue Aug 2, 2024
@hmottestad
owlcsGH-1145 add jakarta.json and no.hasmac to the osgi config
2626640
ignazio1977 pushed a commit that referenced this issue Aug 3, 2024
@reckart @ignazio1977
Issue #1145: Upgrade to RDF4J 5.x
ba0bcaa 
- Upgrade to RDF4J 5.0.1
- Fix issues preventing compilation
- Remove redundant/outdated dependency declarations in distribution modules
- Enhanced TestBase to allow printing the document at the start and end of the round trip
ignazio1977 pushed a commit that referenced this issue Aug 3, 2024
@hmottestad @ignazio1977
GH-1145 update to RDF4J 5.0.2 and disable test case for handling of i…
9c2fb1d 
…nvalid json-ld
ignazio1977 pushed a commit that referenced this issue Aug 3, 2024
@hmottestad @ignazio1977
GH-1145 add jakarta.json and no.hasmac to the osgi config
b296ff5
ignazio1977 added a commit that referenced this issue Aug 3, 2024
@ignazio1977
GH-1145 verify both ignore and throw exception behaviours
2ef0667
ignazio1977 added a commit that referenced this issue Sep 8, 2024
@ignazio1977
fix test error GH-1145
750d455
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@reckart @ignazio1977