Repositories list

• rcsb-common

  Public
  Common constants for java-based projects

  Java

  •

  MIT License

  •0•0•0•0•Updated Mar 12, 2025Mar 12, 2025

• py-rcsb_workflow

  Public
  Python workflow entry points for database and search tools

  Python

  •

  Apache License 2.0

  •3•3•0•2•Updated Mar 12, 2025Mar 12, 2025

• rcsb-mojave-model

  Public
  The RCSB data models

  Java

  •

  MIT License

  •0•1•0•0•Updated Mar 12, 2025Mar 12, 2025

• py-rcsb-api

  Public
  Python interface for RCSB.org API services

  Python

  •

  MIT License

  •1•14•3•1•Updated Mar 12, 2025Mar 12, 2025

• rcsb-training-resources

  Public
  Resources and materials referenced in RCSB PDB training events

  Jupyter Notebook

  •2•2•0•1•Updated Mar 12, 2025Mar 12, 2025

• rcsb-stats

  Public
  Compute archive-wide statistics. Powered by RCSB Search API and BinaryCIF.

  statisticsprotein-data-bankprotein-structure-analysis

  Java

  •1•0•0•0•Updated Mar 12, 2025Mar 12, 2025

• py-rcsb_utils_dictionary

  Public
  RCSB dictionary method utilities

  Python

  •

  Apache License 2.0

  •2•1•3•1•Updated Mar 10, 2025Mar 10, 2025

• py-rcsb_app_chem

  Public
  Chemical search services.

  Python

  •

  Apache License 2.0

  •0•0•0•1•Updated Mar 10, 2025Mar 10, 2025

• py-rcsb_apps_sfconvert

  Public
  Reimplementation of sf_convert

  Python

  •

  Other

  •1•0•0•0•Updated Mar 10, 2025Mar 10, 2025

• py-mmcif

  Public
  mmCIF Core Access Library

  C++

  •

  Other

  •9•42•4•1•Updated Mar 9, 2025Mar 9, 2025

• strucmotif-search

  Public
  Real-time structure motif searching in protein 3D structures using an inverted index strategy

  Java

  •

  MIT License

  •4•11•1•0•Updated Mar 7, 2025Mar 7, 2025

• ciftools-java

  Public
  A Java library for handling text and BinaryCIF files.

  compressionbiology

  Java

  •

  MIT License

  •5•12•0•0•Updated Mar 7, 2025Mar 7, 2025

• py-rcsb_db

  Public
  RCSB Python Database Utility Classes

  Python

  •

  Other

  •5•11•5•3•Updated Mar 7, 2025Mar 7, 2025

• rcsb-embedding-model

  Public
  Embedding model for structure similarity search

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Mar 7, 2025Mar 7, 2025

• mmcif_website

  Public
  PDBx/mmCIF Resource Site Static Content

  HTML

  •0•0•0•0•Updated Mar 7, 2025Mar 7, 2025

• rcsb-documentation

  Public
  JavaScript

  •0•0•0•0•Updated Mar 4, 2025Mar 4, 2025

• py-rcsb_utils_repository

  Public
  RCSB repository data mangement utilities

  Python

  •

  Apache License 2.0

  •0•0•0•1•Updated Mar 4, 2025Mar 4, 2025

• py-rcsb_exdb_assets

  Public
  Python

  •

  Other

  •3•0•0•2•Updated Mar 3, 2025Mar 3, 2025

• py-rcsb_utils_chem

  Public
  Utilities for managing and searching PDB chemical components

  Python

  •

  Apache License 2.0

  •3•1•0•0•Updated Feb 26, 2025Feb 26, 2025

• py-mmcif_sitegen

  Public
  mmCIF Dictionary Site Generator

  Python

  •

  Other

  •0•0•0•0•Updated Feb 26, 2025Feb 26, 2025

• py-rcsb_exdb

  Public
  Python

  •

  Apache License 2.0

  •3•0•0•0•Updated Feb 17, 2025Feb 17, 2025

• rcsb-sequence-coordinates

  Public
  The RCSB PDB GraphQL service for amino/nucleic acid and identifier mapping

  JavaScript

  •

  MIT License

  •0•0•0•1•Updated Feb 13, 2025Feb 13, 2025

• devops-cicd-github-actions

  Public
  Repo to test CI/CD pipelines and store reusable workflows

  Smarty

  •2•1•2•1•Updated Feb 7, 2025Feb 7, 2025

• rcsb-saguaro-3d

  Public
  TypeScript

  •

  MIT License

  •8•28•1•0•Updated Jan 29, 2025Jan 29, 2025

• rcsb-saguaro-app

  Public
  RCSB Saguaro 1D Feature Viewer Web App

  TypeScript

  •

  MIT License

  •6•8•0•1•Updated Jan 29, 2025Jan 29, 2025

• mmcif_website_file_assets

  Public
  PDBx/mmCIF Resource Site Dictionary and Schema File Assets

  Shell

  •0•1•0•0•Updated Jan 28, 2025Jan 28, 2025

• py-rcsb_mock-data

  Public
  Common mock data used to in testing RCSB Python modules

  3•0•0•0•Updated Jan 23, 2025Jan 23, 2025

• rcsb-idmapper

  Public
  IdMapper service extracted from Arches

  Java

  •

  The Unlicense

  •0•1•2•0•Updated Jan 16, 2025Jan 16, 2025

• py-rcsbsearchapi

  Public
  Python interface for the RCSB PDB search API.

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •3•59•0•0•Updated Dec 11, 2024Dec 11, 2024

• py-rcsb_utils_seqalign

  Public
  Sequence alignment utilities

  Python

  •

  Other

  •3•0•1•0•Updated Dec 10, 2024Dec 10, 2024