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    13 repositories

    • crispey3-epistasis

      Public
      Code for designing CRISPEY-BAR library and data processing of sequencing reads for yeast epistasis project
      Jupyter Notebook
      •1•0•0•0•Updated May 14, 2022May 14, 2022

    • fraser_code

      Public
      Commonly used code from the Fraser Lab
      R
      •1•0•0•0•Updated Mar 16, 2021Mar 16, 2021

    • Agoglia_HumanChimpanzee2020

      Public
      Code used for data analysis and figure making for the human-chimpanzee cell fusion project/manuscript.
      R
      •
      MIT License
      •0•4•0•0•Updated Nov 28, 2020Nov 28, 2020

    • Hornet

      Public
      Simple tools for unbiased allele-specific read mapping based on WASP by the Pritchard lab
      Python
      •
      Apache License 2.0
      •51•6•0•0•Updated Nov 28, 2020Nov 28, 2020

    • SCREECh

      Public
      Python
      •1•0•0•0•Updated May 21, 2019May 21, 2019

    • dicty

      Public
      Python
      •1•0•0•0•Updated May 21, 2019May 21, 2019

    • CombsOenocytes2018

      Public
      Python
      •0•0•0•0•Updated Sep 26, 2018Sep 26, 2018

    • ASEr

      Public
      Get ASE counts from BAMs or raw fastq data -- repackage of pipeline by Carlo Artieri
      Python
      •
      MIT License
      •3•6•9•2•Updated Aug 15, 2018Aug 15, 2018

    • HybridSliceSeq

      Public
      Python
      •1•1•0•0•Updated Jun 18, 2018Jun 18, 2018

    • enrich_pvalues

      Public
      Compare one dataset to another at a variety of p-value cutoffs to pick the best p-value
      consolesciencestatisticsmolecular-biology
      Python
      •
      MIT License
      •0•2•0•0•Updated Jun 1, 2018Jun 1, 2018

    • cisVar

      Public
      cisVar scripts.
      bioinformaticspipelinebiologyatac-seqpublishedmolecular-biologychipseq
      Python
      •1•6•0•0•Updated May 18, 2018May 18, 2018

    • pipelines

      Public
      Lab snakemake pipelines
      0•0•0•0•Updated Aug 1, 2017Aug 1, 2017

    • scripts

      Public
      A collection of single scripts that do not need their own repository
      Python
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Jul 29, 2017Jul 29, 2017