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    652 repositories

    • Synapse-Repository-Services

      Public
      The Synapse Repository Services project is the home of the JSON REST web services for Synapse.
      Java
      •
      Apache License 2.0
      •53•36•0•4•Updated Nov 9, 2024Nov 9, 2024

    • schematic

      Public
      Package for biomedical data model and metadata ingress management
      schemabiomedical-informaticsdata-ingress
      Python
      •
      MIT License
      •26•22•0•9•Updated Nov 9, 2024Nov 9, 2024

    • snowflake

      Public
      Snowflake Administration, Transformations, and Analytics
      snowflake
      Python
      •
      Apache License 2.0
      •4•4•0•5•Updated Nov 8, 2024Nov 8, 2024

    • shiny-base

      Public
      Base Docker image for Shiny applications
      Dockerfile
      •1•0•0•1•Updated Nov 8, 2024Nov 8, 2024

    • genie-project-requests

      Public
      Stand-alone scripts for quick checks or tasks for GENIE
      genie
      R
      •
      MIT License
      •1•0•0•0•Updated Nov 8, 2024Nov 8, 2024

    • data_curator

      Public
      Data and metadata ingress app
      R
      •
      Apache License 2.0
      •21•10•49•0•Updated Nov 8, 2024Nov 8, 2024

    • Synapse-Stack-Builder

      Public
      Project for building a complete Synapse Stack
      Java
      •
      Apache License 2.0
      •19•5•0•1•Updated Nov 8, 2024Nov 8, 2024

    • Exceptional-Longevity

      Public
      Repository to store scripts for data curation and backend portal drivers for the ELITE Portal.
      0•1•0•0•Updated Nov 8, 2024Nov 8, 2024

    • SynapseWebClient

      Public
      The web client of the Synapse REST service core
      JavaScript
      •
      Apache License 2.0
      •37•23•1•7•Updated Nov 8, 2024Nov 8, 2024

    • synapse-web-monorepo

      Public
      Monorepo for Synapse Web projects
      TypeScript
      •23•4•3•40•Updated Nov 8, 2024Nov 8, 2024

    • sage-monorepo

      Public
      Where OpenChallenges, Schematic, and other Sage open source apps are built
      angularopenapischematicmonorepofull-stackfairdeveloper-experiencenxagoraspecification-first
      TypeScript
      •
      Apache License 2.0
      •12•23•152•6•Updated Nov 8, 2024Nov 8, 2024

    • agora-data-tools

      Public
      A place for Agora's ETL and Data Testing
      Jupyter Notebook
      •
      Apache License 2.0
      •3•1•0•0•Updated Nov 7, 2024Nov 7, 2024

    • genie-bpc-drug-off-label

      Public
      Repository for the code relating to off-label and off-guideline use of drugs in the BPC data.
      R
      •0•0•0•0•Updated Nov 7, 2024Nov 7, 2024

    • Agora

      Public
      TypeScript
      •
      MIT License
      •12•7•0•12•Updated Nov 6, 2024Nov 6, 2024

    • agora2-infra

      Public
      Jinja
      •
      Apache License 2.0
      •2•0•0•1•Updated Nov 6, 2024Nov 6, 2024

    • synapsePythonClient

      Public
      Programmatic interface to Synapse services for Python
      synapsepython
      Python
      •
      Apache License 2.0
      •68•67•3•2•Updated Nov 6, 2024Nov 6, 2024

    • streamlit-snowflake-template

      Public template
      Python
      •
      Apache License 2.0
      •0•2•0•0•Updated Nov 6, 2024Nov 6, 2024

    • Genie

      Public
      Validation and processing of GENIE files
      pythonetlgeniedpecomponc
      Python
      •
      MIT License
      •9•12•1•4•Updated Nov 5, 2024Nov 5, 2024

    • recover

      Public
      A data pipeline for processing data from the RECOVER project.
      Python
      •
      Apache License 2.0
      •1•5•0•0•Updated Nov 5, 2024Nov 5, 2024

    • BridgeServer2

      Public
      Bridge Server 2.0 running on Spring Boot
      Java
      •
      Other
      •22•5•0•1•Updated Nov 5, 2024Nov 5, 2024

    • data_curator-infra

      Public
      CDK-based template for deploying a containerized application to AWS
      Python
      •6•1•0•0•Updated Nov 5, 2024Nov 5, 2024

    • agora-data-manager

      Public
      Tool to manage agora data
      Shell
      •
      Apache License 2.0
      •7•0•0•0•Updated Nov 5, 2024Nov 5, 2024

    • Synapse-Migration-Utility

      Public
      Utility to migrate one Synapse stack to another
      Java
      •
      Apache License 2.0
      •4•0•0•0•Updated Nov 5, 2024Nov 5, 2024

    • core-models

      Public
      Sage repository for data models and core models work
      Python
      •1•0•3•0•Updated Nov 4, 2024Nov 4, 2024

    • Sage-Governance-Documents

      Public
      Repository of Governance documents for systems like Synapse
      Apache License 2.0
      •1•0•0•1•Updated Nov 4, 2024Nov 4, 2024

    • multi-services-ecs-demo

      Public
      Demo of an ECS deployment with multiple services
      Python
      •0•0•0•0•Updated Nov 2, 2024Nov 2, 2024

    • data_curator_config

      Public
      Project configurations for the Data Curator App
      19•2•0•0•Updated Nov 1, 2024Nov 1, 2024

    • genie-bpc-pipeline

      Public
      GENIE BPC pipeline scripts
      genie
      R
      •
      MIT License
      •1•2•0•4•Updated Nov 1, 2024Nov 1, 2024

    • synapse-docker-registry

      Public
      ECS deployment for the Synapse Docker registry
      Python
      •2•0•0•0•Updated Oct 31, 2024Oct 31, 2024

    • s3-synapse-sync

      Public
      Python
      •
      Apache License 2.0
      •6•3•3•1•Updated Oct 30, 2024Oct 30, 2024