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@OceanOptics Ocean Optics

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    30 repositories

    • ifcb-tools

      Public
      Get your IFCB data ready for EcoTaxa.
      feature-extractionecotaxaclassificationifcb
      Python
      •
      MIT License
      •3•7•1•0•Updated Apr 16, 2025Apr 16, 2025

    • Inlinino

      Public
      A modular software data logger for oceanography.
      serialanalogloggeroceanography
      Python
      •
      GNU General Public License v3.0
      •6•11•0•0•Updated Apr 1, 2025Apr 1, 2025

    • vdiup-argo

      Public
      Python
      •0•0•0•0•Updated Mar 20, 2025Mar 20, 2025

    • bb_cal

      Public
      This repository includes codes used in calibratioin of backscattering sensors.
      calibrationbeadsbackscattering
      MATLAB
      •
      GNU General Public License v2.0
      •0•0•0•0•Updated Mar 6, 2025Mar 6, 2025

    • pySAS

      Public
      Python
      •0•5•0•1•Updated Feb 19, 2025Feb 19, 2025

    • getOC

      Public
      Bulk download Ocean Color images.
      Python
      •
      MIT License
      •14•47•3•0•Updated Jan 22, 2025Jan 22, 2025

    • InLineAnalysis

      Public
      Process optical in-line data measured continuously on research vessel
      inlineacsecoflowthroughlisstunderwayinstrumentvessel
      MATLAB
      •
      MIT License
      •2•16•0•0•Updated Jul 27, 2024Jul 27, 2024

    • pySatlantic

      Public
      A python package to unpack binary messages from Satlantic instruments.
      parser
      Python
      •
      MIT License
      •1•5•0•0•Updated Apr 22, 2024Apr 22, 2024

    • Kd_GF

      Public
      Compute the diffuse attenuation coefficient of light in water from Remote Sensing Reflectance (Kd) following Begouen et. al., 2024
      MATLAB
      •0•0•0•0•Updated Feb 8, 2024Feb 8, 2024

    • pyACS

      Public
      Python package to unpack and calibrate binary data from a WetLabs ACS
      Python
      •
      MIT License
      •2•2•0•1•Updated Feb 2, 2024Feb 2, 2024

    • pyTriOS

      Public
      PyTrios module to communicate with TriOS optical sensors over a serial port
      Python
      •
      GNU General Public License v3.0
      •4•0•0•0•Updated Oct 8, 2023Oct 8, 2023

    • High-resolution-satellites-primer-codes

      Public
      High resolution remote sensing recipes
      Jupyter Notebook
      •
      MIT License
      •1•4•0•0•Updated Aug 8, 2023Aug 8, 2023

    • getLandsatL2_SST

      Public
      Extract sea surface temperature from Landsat 4, 5, 7, 8 and 9 collection 2 level 2 images
      MATLAB
      •
      MIT License
      •0•5•1•0•Updated May 30, 2023May 30, 2023

    • MW_algorithm_satellite

      Public
      MATLAB
      •2•2•0•0•Updated Dec 20, 2022Dec 20, 2022

    • MW_algorithm

      Public
      MATLAB
      •3•8•0•0•Updated Dec 20, 2022Dec 20, 2022

    • Springer

      Public
      Backscattering Sensor for Open Ocean
      C++
      •1•0•0•0•Updated Sep 2, 2022Sep 2, 2022

    • Class_Minion2

      Public
      C++
      •3•1•0•0•Updated Jun 27, 2022Jun 27, 2022

    • MieTheory

      Public
      MATLAB
      •
      MIT License
      •0•2•0•0•Updated Jun 9, 2022Jun 9, 2022

    • AggregateOptics

      Public
      Model for beam attenuation of aggregated particles a la Boss et al. 2009 (MATLAB)
      MATLAB
      •
      MIT License
      •0•0•0•0•Updated Jun 9, 2022Jun 9, 2022

    • SeaDAS_batch

      Public
      Batch processing with SeaDAS
      Python
      •
      MIT License
      •3•4•0•0•Updated Apr 22, 2021Apr 22, 2021

    • process_TSRB

      Public
      Code to read the files output from SatCon and produce Rrs spectra and chlorophyll concentrations
      MATLAB
      •
      MIT License
      •1•1•0•0•Updated May 28, 2020May 28, 2020

    • FloatSpikeAnalysis

      Public
      MATLAB
      •
      MIT License
      •1•2•0•0•Updated Nov 5, 2019Nov 5, 2019

    • MISCToolbox

      Public
      Matlab tools for oceanographic analysis.
      MATLAB
      •
      GNU General Public License v2.0
      •2•3•0•0•Updated Aug 22, 2019Aug 22, 2019

    • FloatExplorer

      Public
      Explore Bio-Argo profiles with ease.
      bio-argoflaskdashboard
      JavaScript
      •
      GNU General Public License v3.0
      •1•1•0•0•Updated Mar 22, 2019Mar 22, 2019

    • FloatProcessor

      Public
      Process Bio-Argo profiles with ease.
      processingbio-argocalibration
      Python
      •
      GNU General Public License v3.0
      •3•2•0•0•Updated Mar 21, 2019Mar 21, 2019

    • IFCB_EcoTaxa_analysis

      Public
      A set of functions to process EcoTaxa .tsv files for particle size and taxonomic group analysis.
      MATLAB
      •
      MIT License
      •2•1•0•0•Updated Aug 2, 2018Aug 2, 2018

    • pylr2

      Public
      Linear Regression Type II Models
      Python
      •
      MIT License
      •2•14•0•0•Updated Mar 16, 2018Mar 16, 2018

    • ACCode

      Public archive
      Code for running ac data in matlab, [recommend to use InLineAnalysis instead]
      MATLAB
      •1•3•0•0•Updated Feb 23, 2017Feb 23, 2017

    • Instrumentino_fork

      Public archive
      Instrumentino is an open-source modular graphical user interface framework for controlling Arduino based experimental instruments
      Python
      •
      GNU General Public License v3.0
      •59•3•0•0•Updated Jun 26, 2016Jun 26, 2016

    • TaraOceans

      Public archive
      Original Matlab code for processing Tara Oceans data prior to February 2015
      MATLAB
      •1•1•0•0•Updated Mar 3, 2015Mar 3, 2015