Repositories list

• PublicAssets

  Public
  Your site is published at https://elucidatainc.github.io/PublicAssets/

  Jupyter Notebook

  •2•2•0•0•Updated Nov 4, 2024Nov 4, 2024

• nf-polly

  Public
  Groovy

  •

  Apache License 2.0

  •0•0•0•1•Updated Oct 30, 2024Oct 30, 2024

• dhr-data-pipeline

  Public
  0•0•0•3•Updated Oct 23, 2024Oct 23, 2024

• svs_processor

  Public
  Python script to manage SVS files, extract metadata and convert to PNG

  Python

  •0•0•0•0•Updated Oct 16, 2024Oct 16, 2024

• polly-docs

  Public
  HTML

  •10•2•0•1•Updated Sep 17, 2024Sep 17, 2024

• DataModel

  Public
  Boilerplate for a unified biological data model for biomedical molecular data on Polly

  0•0•0•2•Updated Aug 27, 2024Aug 27, 2024

• PollyCommonR

  Public
  R

  •1•1•0•0•Updated Aug 5, 2024Aug 5, 2024

• TranscriptomeInsight

  Public
  Data Model Definition for Owkin Data

  Python

  •0•1•2•3•Updated May 24, 2024May 24, 2024

• unified-data-model-tree-graph

  Public
  HTML

  •0•0•0•0•Updated May 23, 2024May 23, 2024

• micro-array-data-ids

  Public
  https://elucidatainc.github.io/micro-array-data-ids/index.html

  Python

  •1•1•0•3•Updated May 3, 2024May 3, 2024

• mimic3-data-model

  Public
  Data Model Definition for MIMIC 3 using openEHR specs

  Java

  •0•0•0•1•Updated Apr 29, 2024Apr 29, 2024

• ehr-data-model

  Public
  Data Model Definition for EHR Data

  0•0•0•0•Updated Apr 19, 2024Apr 19, 2024

• cellxgene

  Public
  JavaScript

  •

  MIT License

  •0•0•0•1•Updated Mar 24, 2024Mar 24, 2024

• snakemake_poc

  Public
  POC for IMBDx

  Python

  •0•0•0•0•Updated Dec 13, 2023Dec 13, 2023

• jupyter-resource-usage

  Public
  Jupyter Notebook Extension for monitoring your own Resource Usage

  Python

  •

  BSD 2-Clause "Simplified" License

  •102•0•0•3•Updated Oct 8, 2023Oct 8, 2023

• polly-python

  Public
  This space is intended to provide support to the users of polly-python. For now, the code of polly-python is kept proprietary. Know more at PyPi: https://pypi.org/project/polly-python/, documentation: https://docs.elucidata.io/Polly%20Python/Capabilities%20Diagram.html and website: www.elucidata.io/

  Jupyter Notebook

  •6•29•12•1•Updated Jul 27, 2023Jul 27, 2023

• knowledge-repo

  Public
  A next-generation curated knowledge sharing platform for data scientists and other technical professions.

  JavaScript

  •

  Apache License 2.0

  •687•3•0•3•Updated Jul 20, 2023Jul 20, 2023

• sql2es

  Public
  JavaScript

  •

  Apache License 2.0

  •0•0•0•4•Updated Jul 19, 2023Jul 19, 2023

• cmapPy

  Public
  Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/tools

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •76•0•0•2•Updated Jul 18, 2023Jul 18, 2023

• crispor-cli

  Public
  CLI only part of CRISPOR Website

  Python

  •

  Other

  •1•2•8•3•Updated Jul 6, 2023Jul 6, 2023

• NA_Correction

  Public
  Python

  •2•3•4•17•Updated May 25, 2023May 25, 2023

• corna

  Public
  Python

  •1•6•5•10•Updated May 25, 2023May 25, 2023

• elmavenwebsite

  Public
  metalsmith website

  HTML

  •0•0•0•2•Updated Apr 30, 2023Apr 30, 2023

• rtail

  Public
  SCSS

  •0•0•0•7•Updated Apr 22, 2023Apr 22, 2023

• cellxgene_vip_repo

  Public
  HTML

  •

  MIT License

  •0•0•0•0•Updated Apr 13, 2023Apr 13, 2023

• elucidatainc.github

  Public
  Website for El-Maven.

  CSS

  •

  MIT License

  •0•0•17•1•Updated Mar 16, 2023Mar 16, 2023

• crispor

  Public
  All source code of the crispor.org website

  C

  •

  Other

  •42•3•0•3•Updated Mar 16, 2023Mar 16, 2023

• mapGCT

  Public
  GCT file handling

  R

  •1•0•0•0•Updated Jan 20, 2023Jan 20, 2023

• PollyMetaboR

  Public
  R

  •1•0•0•0•Updated Jan 18, 2023Jan 18, 2023

• cellxgene_VIP

  Public
  Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also performs differential gene expression analysis and provides a Command Line Interface (CLI) for advanced users to perform analysis using python and R.

  HTML

  •

  MIT License

  •45•0•0•0•Updated Jan 9, 2023Jan 9, 2023