Fix results processing of nag optimizers (#544) #1783
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--- | |
name: main | |
# Automatically cancel a previous run. | |
concurrency: | |
group: ${{ github.head_ref || github.run_id }} | |
cancel-in-progress: true | |
on: | |
push: | |
branches: | |
- main | |
pull_request: | |
branches: | |
- '*' | |
jobs: | |
run-tests-linux: | |
name: Run tests for ${{ matrix.os }} on ${{ matrix.python-version }} | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: | |
- ubuntu-latest | |
python-version: | |
- '3.10' | |
- '3.11' | |
- '3.12' | |
steps: | |
- uses: actions/checkout@v4 | |
- name: create build environment | |
uses: mamba-org/setup-micromamba@v1 | |
with: | |
environment-file: ./.tools/envs/testenv-linux.yml | |
cache-environment: true | |
create-args: | | |
python=${{ matrix.python-version }} | |
- name: run pytest | |
shell: bash -l {0} | |
run: | | |
micromamba activate optimagic | |
pytest --cov-report=xml --cov=./ | |
- name: Upload coverage report. | |
if: runner.os == 'Linux' && matrix.python-version == '3.10' | |
uses: codecov/codecov-action@v4 | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} | |
run-tests-win-and-mac: | |
name: Run tests for ${{ matrix.os }} on ${{ matrix.python-version }} | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: | |
- macos-latest | |
- windows-latest | |
python-version: | |
- '3.10' | |
- '3.11' | |
steps: | |
- uses: actions/checkout@v4 | |
- name: create build environment | |
uses: mamba-org/setup-micromamba@v1 | |
with: | |
environment-file: ./.tools/envs/testenv-others.yml | |
cache-environment: true | |
create-args: | | |
python=${{ matrix.python-version }} | |
- name: run pytest | |
shell: bash -l {0} | |
run: | | |
micromamba activate optimagic | |
pytest -m "not slow and not jax" | |
run-tests-with-old-pandas: | |
# This job is only for testing if optimagic works with pandas<2, as many pandas | |
# functions we use will be deprecated in pandas 3. optimagic's behavior for older | |
# verions is handled in src/optimagic/compat.py. For compatibility with we have to | |
# restrict numpy<2. | |
name: Run tests for ${{ matrix.os}} on ${{ matrix.python-version }} with pandas 1 | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: | |
- ubuntu-latest | |
python-version: | |
- '3.10' | |
steps: | |
- uses: actions/checkout@v4 | |
- name: create build environment | |
uses: mamba-org/setup-micromamba@v1 | |
with: | |
environment-file: ./.tools/envs/testenv-pandas.yml | |
cache-environment: true | |
create-args: | | |
python=${{ matrix.python-version }} | |
- name: run pytest | |
shell: bash -l {0} | |
run: | | |
micromamba activate optimagic | |
pytest -m "not slow and not jax" | |
run-tests-with-old-numpy: | |
# This job is only for testing if optimagic works with numpy<2. Because we already | |
# test pandas<2 with numpy<2, in this environment we restrict pandas>=2. | |
name: Run tests for ${{ matrix.os}} on ${{ matrix.python-version }} with numpy 1 | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: | |
- ubuntu-latest | |
python-version: | |
- '3.10' | |
steps: | |
- uses: actions/checkout@v4 | |
- name: create build environment | |
uses: mamba-org/setup-micromamba@v1 | |
with: | |
environment-file: ./.tools/envs/testenv-numpy.yml | |
cache-environment: true | |
create-args: | | |
python=${{ matrix.python-version }} | |
- name: run pytest | |
shell: bash -l {0} | |
run: | | |
micromamba activate optimagic | |
pytest -m "not slow and not jax" | |
code-in-docs: | |
name: Run code snippets in documentation | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
- name: create build environment | |
uses: mamba-org/setup-micromamba@v1 | |
with: | |
environment-file: ./.tools/envs/testenv-linux.yml | |
environment-name: optimagic | |
cache-environment: true | |
create-args: | | |
python=3.12 | |
- name: run sphinx | |
shell: bash -l {0} | |
run: |- | |
micromamba activate optimagic | |
cd docs/source | |
python -m doctest -v how_to/how_to_constraints.md | |
run-mypy: | |
name: Run mypy | |
runs-on: ubuntu-latest | |
strategy: | |
fail-fast: false | |
steps: | |
- uses: actions/checkout@v4 | |
- name: create build environment | |
uses: mamba-org/setup-micromamba@v1 | |
with: | |
environment-file: ./.tools/envs/testenv-linux.yml | |
environment-name: optimagic | |
cache-environment: true | |
create-args: | | |
python=3.10 | |
- name: Run mypy | |
shell: bash -l {0} | |
run: |- | |
micromamba activate optimagic | |
mypy |