add scanvi (#191) #209

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Job	Run time
list	2m 33s
build (migration/list_git_shas, /home/runner/work/openproblems-v2/openproblems-v2/src/migration/l...	2m 54s
build (migration/update_bibtex, /home/runner/work/openproblems-v2/openproblems-v2/src/migration/u...	3m 51s
build (migration/check_migration_status, /home/runner/work/openproblems-v2/openproblems-v2/src/mi...	3m 29s
build (datasets/processors/svd, /home/runner/work/openproblems-v2/openproblems-v2/src/datasets/pr...	1m 59s
build (datasets/processors/pca, /home/runner/work/openproblems-v2/openproblems-v2/src/datasets/pr...	3m 38s
build (datasets/processors/knn, /home/runner/work/openproblems-v2/openproblems-v2/src/datasets/pr...	3m 42s
build (datasets/processors/hvg, /home/runner/work/openproblems-v2/openproblems-v2/src/datasets/pr...	3m 35s
build (datasets/processors/subsample, /home/runner/work/openproblems-v2/openproblems-v2/src/datas...	1m 35s
build (datasets/normalization/l1_sqrt, /home/runner/work/openproblems-v2/openproblems-v2/src/data...	1m 57s
build (datasets/normalization/log_cpm, /home/runner/work/openproblems-v2/openproblems-v2/src/data...	3m 26s
build (datasets/normalization/sqrt_cpm, /home/runner/work/openproblems-v2/openproblems-v2/src/dat...	2m 43s
build (datasets/normalization/log_scran_pooling, /home/runner/work/openproblems-v2/openproblems-v...	2m 59s
build (datasets/loaders/openproblems_v1, /home/runner/work/openproblems-v2/openproblems-v2/src/da...	5m 12s
build (datasets/loaders/openproblems_v1_multimodal, /home/runner/work/openproblems-v2/openproblem...	2m 55s
build (common/get_execution_info, /home/runner/work/openproblems-v2/openproblems-v2/src/common/ge...	1m 47s
build (common/create_task_readme, /home/runner/work/openproblems-v2/openproblems-v2/src/common/cr...	4m 16s
build (common/sync_test_resources, /home/runner/work/openproblems-v2/openproblems-v2/src/common/s...	1m 0s
build (common/get_task_info, /home/runner/work/openproblems-v2/openproblems-v2/src/common/get_tas...	3m 12s
build (common/get_metric_info, /home/runner/work/openproblems-v2/openproblems-v2/src/common/get_m...	4m 22s
build (common/create_component, /home/runner/work/openproblems-v2/openproblems-v2/src/common/crea...	3m 24s
build (common/get_method_info, /home/runner/work/openproblems-v2/openproblems-v2/src/common/get_m...	3m 46s
build (common/check_dataset_schema, /home/runner/work/openproblems-v2/openproblems-v2/src/common/...	1m 8s
build (common/check_yaml_schema, /home/runner/work/openproblems-v2/openproblems-v2/src/common/che...	2m 37s
build (common/get_api_info, /home/runner/work/openproblems-v2/openproblems-v2/src/common/get_api_...	3m 49s
build (common/extract_scores, /home/runner/work/openproblems-v2/openproblems-v2/src/common/extrac...	2m 19s
build (predict_modality/metrics/correlation, /home/runner/work/openproblems-v2/openproblems-v2/sr...	5m 14s
build (predict_modality/metrics/mse, /home/runner/work/openproblems-v2/openproblems-v2/src/tasks/...	1m 35s
build (predict_modality/control_methods/random_predict, /home/runner/work/openproblems-v2/openpro...	1m 39s
build (predict_modality/control_methods/solution, /home/runner/work/openproblems-v2/openproblems-...	3m 39s
build (predict_modality/control_methods/mean_per_gene, /home/runner/work/openproblems-v2/openprob...	1m 19s
build (predict_modality/control_methods/zeros, /home/runner/work/openproblems-v2/openproblems-v2/...	2m 49s
build (predict_modality/process_dataset, /home/runner/work/openproblems-v2/openproblems-v2/src/ta...	4m 0s
build (predict_modality/methods/newwave_knnr, /home/runner/work/openproblems-v2/openproblems-v2/s...	4m 44s
build (predict_modality/methods/lm, /home/runner/work/openproblems-v2/openproblems-v2/src/tasks/p...	2m 11s
build (predict_modality/methods/knnr_py, /home/runner/work/openproblems-v2/openproblems-v2/src/ta...	3m 33s
build (predict_modality/methods/random_forest, /home/runner/work/openproblems-v2/openproblems-v2/...	2m 0s
build (predict_modality/methods/knnr_r, /home/runner/work/openproblems-v2/openproblems-v2/src/tas...	3m 19s
build (denoising/metrics/poisson, /home/runner/work/openproblems-v2/openproblems-v2/src/tasks/den...	2m 33s
build (denoising/metrics/mse, /home/runner/work/openproblems-v2/openproblems-v2/src/tasks/denoisi...	3m 9s
build (denoising/control_methods/perfect_denoising, /home/runner/work/openproblems-v2/openproblem...	4m 13s
build (denoising/control_methods/no_denoising, /home/runner/work/openproblems-v2/openproblems-v2/...	1m 9s
build (denoising/process_dataset, /home/runner/work/openproblems-v2/openproblems-v2/src/tasks/den...	1m 28s
build (denoising/methods/dca, /home/runner/work/openproblems-v2/openproblems-v2/src/tasks/denoisi...	4m 19s
build (denoising/methods/knn_smoothing, /home/runner/work/openproblems-v2/openproblems-v2/src/tas...	1m 35s
build (denoising/methods/magic, /home/runner/work/openproblems-v2/openproblems-v2/src/tasks/denoi...	3m 5s
build (denoising/methods/alra, /home/runner/work/openproblems-v2/openproblems-v2/src/tasks/denois...	4m 19s
build (batch_integration/metrics/asw_label, /home/runner/work/openproblems-v2/openproblems-v2/src...	3m 10s
build (batch_integration/metrics/pcr, /home/runner/work/openproblems-v2/openproblems-v2/src/tasks...	3m 2s
build (batch_integration/metrics/cell_cycle_conservation, /home/runner/work/openproblems-v2/openp...	3m 9s
build (batch_integration/metrics/asw_batch, /home/runner/work/openproblems-v2/openproblems-v2/src...	3m 53s
build (batch_integration/metrics/clustering_overlap, /home/runner/work/openproblems-v2/openproble...	3m 0s
build (batch_integration/control_methods/random_integration, /home/runner/work/openproblems-v2/op...	3m 50s
build (batch_integration/control_methods/random_embed_cell_jitter, /home/runner/work/openproblems...	4m 14s
build (batch_integration/control_methods/random_embed_cell, /home/runner/work/openproblems-v2/ope...	3m 5s
build (batch_integration/control_methods/no_integration_batch, /home/runner/work/openproblems-v2/...	4m 3s
build (batch_integration/process_dataset, /home/runner/work/openproblems-v2/openproblems-v2/src/t...	1m 47s
build (batch_integration/transformers/feature_to_embed, /home/runner/work/openproblems-v2/openpro...	2m 17s
build (batch_integration/transformers/embed_to_graph, /home/runner/work/openproblems-v2/openprobl...	3m 24s
build (batch_integration/methods/scanorama_feature, /home/runner/work/openproblems-v2/openproblem...	4m 15s
build (batch_integration/methods/combat, /home/runner/work/openproblems-v2/openproblems-v2/src/ta...	3m 7s
build (batch_integration/methods/scanorama_embed, /home/runner/work/openproblems-v2/openproblems-...	3m 23s
build (batch_integration/methods/bbknn, /home/runner/work/openproblems-v2/openproblems-v2/src/tas...	3m 21s
build (batch_integration/methods/scanvi, /home/runner/work/openproblems-v2/openproblems-v2/src/ta...	9m 47s
build (batch_integration/methods/scvi, /home/runner/work/openproblems-v2/openproblems-v2/src/task...	10m 32s
build (label_projection/metrics/f1, /home/runner/work/openproblems-v2/openproblems-v2/src/tasks/l...	2m 32s
build (label_projection/metrics/accuracy, /home/runner/work/openproblems-v2/openproblems-v2/src/t...	3m 50s
build (label_projection/control_methods/true_labels, /home/runner/work/openproblems-v2/openproble...	1m 8s
build (label_projection/control_methods/random_labels, /home/runner/work/openproblems-v2/openprob...	1m 42s
build (label_projection/control_methods/majority_vote, /home/runner/work/openproblems-v2/openprob...	2m 37s
build (label_projection/process_dataset, /home/runner/work/openproblems-v2/openproblems-v2/src/ta...	2m 56s
build (label_projection/methods/mlp, /home/runner/work/openproblems-v2/openproblems-v2/src/tasks/...	1m 22s
build (label_projection/methods/xgboost, /home/runner/work/openproblems-v2/openproblems-v2/src/ta...	3m 39s
build (label_projection/methods/scanvi_scarches, /home/runner/work/openproblems-v2/openproblems-v...	8m 2s
build (label_projection/methods/knn, /home/runner/work/openproblems-v2/openproblems-v2/src/tasks/...	3m 4s
build (label_projection/methods/scanvi, /home/runner/work/openproblems-v2/openproblems-v2/src/tas...	9m 2s
build (label_projection/methods/logistic_regression, /home/runner/work/openproblems-v2/openproble...	3m 11s
build (dimensionality_reduction/metrics/density_preservation, /home/runner/work/openproblems-v2/o...	4m 13s
build (dimensionality_reduction/metrics/coranking, /home/runner/work/openproblems-v2/openproblems...	1m 40s
build (dimensionality_reduction/metrics/trustworthiness, /home/runner/work/openproblems-v2/openpr...	1m 21s
build (dimensionality_reduction/metrics/rmse, /home/runner/work/openproblems-v2/openproblems-v2/s...	2m 56s
build (dimensionality_reduction/control_methods/true_features, /home/runner/work/openproblems-v2/...	2m 46s
build (dimensionality_reduction/control_methods/random_features, /home/runner/work/openproblems-v...	2m 34s
build (dimensionality_reduction/process_dataset, /home/runner/work/openproblems-v2/openproblems-v...	1m 26s
build (dimensionality_reduction/methods/phate, /home/runner/work/openproblems-v2/openproblems-v2/...	3m 6s
build (dimensionality_reduction/methods/pca, /home/runner/work/openproblems-v2/openproblems-v2/sr...	3m 58s
build (dimensionality_reduction/methods/densmap, /home/runner/work/openproblems-v2/openproblems-v...	1m 58s
build (dimensionality_reduction/methods/neuralee, /home/runner/work/openproblems-v2/openproblems-...	8m 4s
build (dimensionality_reduction/methods/umap, /home/runner/work/openproblems-v2/openproblems-v2/s...	1m 39s
build (dimensionality_reduction/methods/tsne, /home/runner/work/openproblems-v2/openproblems-v2/s...	3m 54s
	4h 55m 59s

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add scanvi (#191) #209

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add scanvi (#191) #209

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