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ENH: no more auto-failing on misparsed versions #3234

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ENH: no more auto-failing on misparsed versions #3234

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TheChymera
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Fixes #3232

Acknowledgment

  • (Mandatory) I acknowledge that this contribution will be available under the Apache 2 license.

@TheChymera TheChymera requested a review from satra August 7, 2020 05:14
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codecov bot commented Aug 7, 2020

Codecov Report

Merging #3234 into master will decrease coverage by 0.87%.
The diff coverage is 50.00%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master    #3234      +/-   ##
==========================================
- Coverage   65.00%   64.12%   -0.88%     
==========================================
  Files         302      300       -2     
  Lines       39929    39868      -61     
  Branches     5279     5273       -6     
==========================================
- Hits        25956    25567     -389     
- Misses      12913    13251     +338     
+ Partials     1060     1050      -10
Flag Coverage Δ
#unittests 64.12% <50.00%> (-0.88%) ⬇️

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
nipype/interfaces/base/core.py 83.48% <50.00%> (-0.26%) ⬇️
nipype/workflows/__init__.py 47.05% <0.00%> (-52.95%) ⬇️
nipype/utils/spm_docs.py 20.00% <0.00%> (-48.00%) ⬇️
nipype/interfaces/freesurfer/base.py 47.58% <0.00%> (-28.23%) ⬇️
nipype/utils/logger.py 56.92% <0.00%> (-27.70%) ⬇️
nipype/testing/fixtures.py 77.92% <0.00%> (-20.78%) ⬇️
nipype/interfaces/dcm2nii.py 49.30% <0.00%> (-15.82%) ⬇️
nipype/interfaces/matlab.py 65.00% <0.00%> (-12.00%) ⬇️
nipype/interfaces/spm/base.py 58.08% <0.00%> (-9.58%) ⬇️
nipype/pkg_info.py 75.00% <0.00%> (-6.25%) ⬇️
... and 13 more

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codecov bot commented Aug 7, 2020

Codecov Report

Merging #3234 into master will decrease coverage by 0.87%.
The diff coverage is 50.00%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master    #3234      +/-   ##
==========================================
- Coverage   65.00%   64.12%   -0.88%     
==========================================
  Files         302      300       -2     
  Lines       39929    39868      -61     
  Branches     5279     5273       -6     
==========================================
- Hits        25956    25567     -389     
- Misses      12913    13251     +338     
+ Partials     1060     1050      -10
Flag Coverage Δ
#unittests 64.12% <50.00%> (-0.88%) ⬇️

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
nipype/interfaces/base/core.py 83.48% <50.00%> (-0.26%) ⬇️
nipype/workflows/__init__.py 47.05% <0.00%> (-52.95%) ⬇️
nipype/utils/spm_docs.py 20.00% <0.00%> (-48.00%) ⬇️
nipype/interfaces/freesurfer/base.py 47.58% <0.00%> (-28.23%) ⬇️
nipype/utils/logger.py 56.92% <0.00%> (-27.70%) ⬇️
nipype/testing/fixtures.py 77.92% <0.00%> (-20.78%) ⬇️
nipype/interfaces/dcm2nii.py 49.30% <0.00%> (-15.82%) ⬇️
nipype/interfaces/matlab.py 65.00% <0.00%> (-12.00%) ⬇️
nipype/interfaces/spm/base.py 58.08% <0.00%> (-9.58%) ⬇️
nipype/pkg_info.py 75.00% <0.00%> (-6.25%) ⬇️
... and 13 more

Continue to review full report at Codecov.

Legend - Click here to learn more
Δ = absolute <relative> (impact), ø = not affected, ? = missing data
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@codecov
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codecov bot commented Aug 7, 2020

Codecov Report

Merging #3234 into master will decrease coverage by 0.87%.
The diff coverage is 50.00%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master    #3234      +/-   ##
==========================================
- Coverage   65.00%   64.12%   -0.88%     
==========================================
  Files         302      300       -2     
  Lines       39929    39868      -61     
  Branches     5279     5273       -6     
==========================================
- Hits        25956    25567     -389     
- Misses      12913    13251     +338     
+ Partials     1060     1050      -10
Flag Coverage Δ
#unittests 64.12% <50.00%> (-0.88%) ⬇️

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
nipype/interfaces/base/core.py 83.48% <50.00%> (-0.26%) ⬇️
nipype/workflows/__init__.py 47.05% <0.00%> (-52.95%) ⬇️
nipype/utils/spm_docs.py 20.00% <0.00%> (-48.00%) ⬇️
nipype/interfaces/freesurfer/base.py 47.58% <0.00%> (-28.23%) ⬇️
nipype/utils/logger.py 56.92% <0.00%> (-27.70%) ⬇️
nipype/testing/fixtures.py 77.92% <0.00%> (-20.78%) ⬇️
nipype/interfaces/dcm2nii.py 49.30% <0.00%> (-15.82%) ⬇️
nipype/interfaces/matlab.py 65.00% <0.00%> (-12.00%) ⬇️
nipype/interfaces/spm/base.py 58.08% <0.00%> (-9.58%) ⬇️
nipype/pkg_info.py 75.00% <0.00%> (-6.25%) ⬇️
... and 13 more

Continue to review full report at Codecov.

Legend - Click here to learn more
Δ = absolute <relative> (impact), ø = not affected, ? = missing data
Powered by Codecov. Last update 5116ee2...d8aea1c. Read the comment docs.

@codecov
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codecov bot commented Aug 7, 2020

Codecov Report

Merging #3234 into master will decrease coverage by 0.87%.
The diff coverage is 50.00%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master    #3234      +/-   ##
==========================================
- Coverage   65.00%   64.12%   -0.88%     
==========================================
  Files         302      300       -2     
  Lines       39929    39868      -61     
  Branches     5279     5273       -6     
==========================================
- Hits        25956    25567     -389     
- Misses      12913    13251     +338     
+ Partials     1060     1050      -10
Flag Coverage Δ
#unittests 64.12% <50.00%> (-0.88%) ⬇️

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
nipype/interfaces/base/core.py 83.48% <50.00%> (-0.26%) ⬇️
nipype/workflows/__init__.py 47.05% <0.00%> (-52.95%) ⬇️
nipype/utils/spm_docs.py 20.00% <0.00%> (-48.00%) ⬇️
nipype/interfaces/freesurfer/base.py 47.58% <0.00%> (-28.23%) ⬇️
nipype/utils/logger.py 56.92% <0.00%> (-27.70%) ⬇️
nipype/testing/fixtures.py 77.92% <0.00%> (-20.78%) ⬇️
nipype/interfaces/dcm2nii.py 49.30% <0.00%> (-15.82%) ⬇️
nipype/interfaces/matlab.py 65.00% <0.00%> (-12.00%) ⬇️
nipype/interfaces/spm/base.py 58.08% <0.00%> (-9.58%) ⬇️
nipype/pkg_info.py 75.00% <0.00%> (-6.25%) ⬇️
... and 13 more

Continue to review full report at Codecov.

Legend - Click here to learn more
Δ = absolute <relative> (impact), ø = not affected, ? = missing data
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@satra
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satra commented Aug 7, 2020

thanks @TheChymera - can we add a test for this by explicitly setting the version info of dummy interface to raise a type error and not to raise one.

mgxd
mgxd reviewed Aug 7, 2020
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codecov bot commented Aug 8, 2020

Codecov Report

Merging #3234 into master will decrease coverage by 0.87%.
The diff coverage is 50.00%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master    #3234      +/-   ##
==========================================
- Coverage   65.00%   64.12%   -0.88%     
==========================================
  Files         302      300       -2     
  Lines       39929    39868      -61     
  Branches     5279     5273       -6     
==========================================
- Hits        25956    25567     -389     
- Misses      12913    13251     +338     
+ Partials     1060     1050      -10
Flag Coverage Δ
#unittests 64.12% <50.00%> (-0.88%) ⬇️

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
nipype/interfaces/base/core.py 83.48% <50.00%> (-0.26%) ⬇️
nipype/workflows/__init__.py 47.05% <0.00%> (-52.95%) ⬇️
nipype/utils/spm_docs.py 20.00% <0.00%> (-48.00%) ⬇️
nipype/interfaces/freesurfer/base.py 47.58% <0.00%> (-28.23%) ⬇️
nipype/utils/logger.py 56.92% <0.00%> (-27.70%) ⬇️
nipype/testing/fixtures.py 77.92% <0.00%> (-20.78%) ⬇️
nipype/interfaces/dcm2nii.py 49.30% <0.00%> (-15.82%) ⬇️
nipype/interfaces/matlab.py 65.00% <0.00%> (-12.00%) ⬇️
nipype/interfaces/spm/base.py 58.08% <0.00%> (-9.58%) ⬇️
nipype/pkg_info.py 75.00% <0.00%> (-6.25%) ⬇️
... and 13 more

Continue to review full report at Codecov.

Legend - Click here to learn more
Δ = absolute <relative> (impact), ø = not affected, ? = missing data
Powered by Codecov. Last update 5116ee2...b4d57d7. Read the comment docs.

@TheChymera
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@effigies @mgxd looking good? Tests seem to fail with some sort of permissions error :-/

@TheChymera
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@satra can you help me out here? As for the tests, I'm really unsure how to test this one :-/

@satra
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satra commented Aug 11, 2020

@djarecka - could you please help @TheChymera over here. the test should simply focus on evaluating the min/max version check of a dummy interface. it shouldn't be specific to ants or any tool at all.

@effigies effigies mentioned this pull request Aug 14, 2020
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@effigies effigies added this to the 1.5.1 milestone Aug 15, 2020
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Proposed a test and small refactor at TheChymera#2.

@effigies
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If we want this in 1.5.1, please rebase onto maint/1.5.x.

@effigies effigies mentioned this pull request Aug 16, 2020
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@effigies effigies closed this Aug 16, 2020
@TheChymera TheChymera deleted the versioncheck branch August 21, 2020 07:46
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