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poetry.lock
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# This file is automatically @generated by Poetry 2.0.1 and should not be changed by hand.
[[package]]
name = "annotated-types"
version = "0.7.0"
description = "Reusable constraint types to use with typing.Annotated"
optional = false
python-versions = ">=3.8"
groups = ["main"]
files = [
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{file = "annotated_types-0.7.0.tar.gz", hash = "sha256:aff07c09a53a08bc8cfccb9c85b05f1aa9a2a6f23728d790723543408344ce89"},
]
[[package]]
name = "antlr4-python3-runtime"
version = "4.9.3"
description = "ANTLR 4.9.3 runtime for Python 3.7"
optional = true
python-versions = "*"
groups = ["main"]
markers = "extra == \"docs\" or extra == \"dev\""
files = [
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]
[[package]]
name = "arrow"
version = "1.3.0"
description = "Better dates & times for Python"
optional = true
python-versions = ">=3.8"
groups = ["main"]
markers = "extra == \"docs\" or extra == \"dev\""
files = [
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{file = "arrow-1.3.0.tar.gz", hash = "sha256:d4540617648cb5f895730f1ad8c82a65f2dad0166f57b75f3ca54759c4d67a85"},
]
[package.dependencies]
python-dateutil = ">=2.7.0"
types-python-dateutil = ">=2.8.10"
[package.extras]
doc = ["doc8", "sphinx (>=7.0.0)", "sphinx-autobuild", "sphinx-autodoc-typehints", "sphinx_rtd_theme (>=1.3.0)"]
test = ["dateparser (==1.*)", "pre-commit", "pytest", "pytest-cov", "pytest-mock", "pytz (==2021.1)", "simplejson (==3.*)"]
[[package]]
name = "attrs"
version = "24.2.0"
description = "Classes Without Boilerplate"
optional = false
python-versions = ">=3.7"
groups = ["main"]
files = [
{file = "attrs-24.2.0-py3-none-any.whl", hash = "sha256:81921eb96de3191c8258c199618104dd27ac608d9366f5e35d011eae1867ede2"},
{file = "attrs-24.2.0.tar.gz", hash = "sha256:5cfb1b9148b5b086569baec03f20d7b6bf3bcacc9a42bebf87ffaaca362f6346"},
]
[package.extras]
benchmark = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-codspeed", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
cov = ["cloudpickle", "coverage[toml] (>=5.3)", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
dev = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pre-commit", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
docs = ["cogapp", "furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier (<24.7)"]
tests = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
tests-mypy = ["mypy (>=1.11.1)", "pytest-mypy-plugins"]
[[package]]
name = "beautifulsoup4"
version = "4.12.3"
description = "Screen-scraping library"
optional = true
python-versions = ">=3.6.0"
groups = ["main"]
markers = "extra == \"docs\" or extra == \"dev\""
files = [
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]
[package.dependencies]
soupsieve = ">1.2"
[package.extras]
cchardet = ["cchardet"]
chardet = ["chardet"]
charset-normalizer = ["charset-normalizer"]
html5lib = ["html5lib"]
lxml = ["lxml"]
[[package]]
name = "bioregistry"
version = "0.11.19"
description = "Integrated registry of biological databases and nomenclatures"
optional = true
python-versions = ">=3.9"
groups = ["main"]
markers = "extra == \"docs\" or extra == \"dev\""
files = [
{file = "bioregistry-0.11.19-py3-none-any.whl", hash = "sha256:c0d591c823c13f84d30cd52e25041b3352fc2b4943544c99002bbf13c4ceef95"},
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]
[package.dependencies]
click = "*"
curies = ">=0.7.0"
more-click = ">=0.1.2"
pydantic = "*"
pystow = ">=0.1.13"
requests = "*"
tqdm = "*"
[package.extras]
align = ["beautifulsoup4", "class-resolver", "defusedxml", "fairsharing-client (>=0.1.0)", "pandas", "pyyaml", "tabulate"]
charts = ["jinja2", "matplotlib", "matplotlib-venn", "pandas", "seaborn"]
docs = ["autodoc-pydantic", "sphinx (>=8)", "sphinx-automodapi", "sphinx-click", "sphinx-rtd-theme (>=3.0)"]
export = ["ndex2", "pyyaml", "rdflib", "rdflib-jsonld"]
gha = ["more-itertools"]
health = ["click-default-group", "jinja2", "pandas", "pyyaml", "tabulate"]
tests = ["coverage", "httpx", "more-itertools", "pytest"]
web = ["a2wsgi", "bootstrap-flask (<=2.0.0)", "curies[fastapi]", "fastapi", "flask (<2.2.4)", "markdown", "pyyaml", "rdflib", "rdflib-endpoint", "rdflib-jsonld", "uvicorn", "werkzeug (<2.3.0)"]
[[package]]
name = "cachetools"
version = "5.5.0"
description = "Extensible memoizing collections and decorators"
optional = true
python-versions = ">=3.7"
groups = ["main"]
markers = "extra == \"docs\" or extra == \"dev\""
files = [
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]
[[package]]
name = "certifi"
version = "2024.8.30"
description = "Python package for providing Mozilla's CA Bundle."
optional = false
python-versions = ">=3.6"
groups = ["main"]
files = [
{file = "certifi-2024.8.30-py3-none-any.whl", hash = "sha256:922820b53db7a7257ffbda3f597266d435245903d80737e34f8a45ff3e3230d8"},
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]
[[package]]
name = "cfgraph"
version = "0.2.1"
description = "rdflib collections flattening graph"
optional = true
python-versions = "*"
groups = ["main"]
markers = "extra == \"docs\" or extra == \"dev\""
files = [
{file = "CFGraph-0.2.1.tar.gz", hash = "sha256:b57fe7044a10b8ff65aa3a8a8ddc7d4cd77bf511b42e57289cd52cbc29f8fe74"},
]
[package.dependencies]
rdflib = ">=0.4.2"
[[package]]
name = "chardet"
version = "5.2.0"
description = "Universal encoding detector for Python 3"
optional = true
python-versions = ">=3.7"
groups = ["main"]
markers = "extra == \"docs\" or extra == \"dev\""
files = [
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]
[[package]]
name = "charset-normalizer"
version = "3.4.0"
description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet."
optional = false
python-versions = ">=3.7.0"
groups = ["main"]
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[[package]]
name = "linkml"
version = "1.8.5"
description = "Linked Open Data Modeling Language"
optional = true
python-versions = ">=3.8.1,<4.0.0"
groups = ["main"]
markers = "extra == \"docs\" or extra == \"dev\""
files = [
{file = "linkml-1.8.5-py3-none-any.whl", hash = "sha256:5a45577a4bb380f3a128f45764545cb2da92dd3310a110de7dc5355796d5ac43"},
{file = "linkml-1.8.5.tar.gz", hash = "sha256:8f31834560ade4b7f1aebc973d22b31951d7061643d32bdcba258a650db9b140"},
]
[package.dependencies]
antlr4-python3-runtime = ">=4.9.0,<4.10"
click = ">=7.0"
graphviz = ">=0.10.1"
hbreader = "*"