-
Notifications
You must be signed in to change notification settings - Fork 193
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Fix #1275 #1278
Fix #1275 #1278
Conversation
@@ -54,4 +54,7 @@ process { | |||
errorStrategy = 'retry' | |||
maxRetries = 2 | |||
} | |||
withName:CUSTOM_DUMPSOFTWAREVERSIONS { | |||
cache = false |
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
Why is this necessary? (I know it was like that before, but i never understood why)
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
So MultiQC is always re-run regardless of whether the pipeline is cached or not.
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
I think there were issues around it not being re-run properly when it had to be but not 💯
nf_core/pipeline-template/modules/nf-core/modules/custom/dumpsoftwareversions/main.nf
Outdated
Show resolved
Hide resolved
Codecov Report
@@ Coverage Diff @@
## dev #1278 +/- ##
==========================================
- Coverage 67.55% 67.50% -0.06%
==========================================
Files 50 50
Lines 5607 5607
==========================================
- Hits 3788 3785 -3
- Misses 1819 1822 +3
Continue to review full report at Codecov.
|
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
LGTM!
Get tests passing again after changing the way we report software versions from each module.