Skip to content

Commit

Permalink
fix type error
Browse files Browse the repository at this point in the history
mashehu committed Dec 10, 2024

Verified

This commit was created on GitHub.com and signed with GitHub’s verified signature. The key has expired.
1 parent 8a78d4b commit 953055d
Showing 1 changed file with 9 additions and 10 deletions.
19 changes: 9 additions & 10 deletions nf_core/pipelines/rocrate.py
Original file line number Diff line number Diff line change
@@ -354,18 +354,17 @@ def update_rocrate(self) -> bool:
"""
# check if we need to output a json file and/or a zip file based on the file extensions
# try to find a json file
json_path = Path(self.pipeline_dir, "ro-crate-metadata.json")
if json_path.exists():
json_path = json_path
else:
json_path = None
json_path: Optional[Path] = None
potential_json_path = Path(self.pipeline_dir, "ro-crate-metadata.json")
if potential_json_path.exists():
json_path = potential_json_path

# try to find a zip file
zip_path = Path(self.pipeline_dir, "ro-crate.crate.zip")
if zip_path.exists():
zip_path = zip_path
else:
zip_path = None
zip_path: Optional[Path] = None
potential_zip_path = Path(self.pipeline_dir, "ro-crate.crate.zip")
if potential_zip_path.exists():
zip_path = potential_zip_path

return self.create_rocrate(json_path=json_path, zip_path=zip_path)


0 comments on commit 953055d

Please sign in to comment.