Merge pull request #1875 from drpatelh/boom

Fix lint warnings for samplesheet_check.nf module
nf-core · Oct 5, 2022 · 0d9099d · 0d9099d
2 parents 2fa3af7 + bc670f2
commit 0d9099d
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -4,6 +4,8 @@
 
 ### Template
 
+- Fix lint warnings for `samplesheet_check.nf` module
+
 ### Linting
 
 ### General

diff --git a/nf_core/pipeline-template/modules/local/samplesheet_check.nf b/nf_core/pipeline-template/modules/local/samplesheet_check.nf
@@ -1,5 +1,6 @@
 process SAMPLESHEET_CHECK {
     tag "$samplesheet"
+    label 'process_single'
 
     conda (params.enable_conda ? "conda-forge::python=3.8.3" : null)
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
@@ -13,6 +14,9 @@ process SAMPLESHEET_CHECK {
     path '*.csv'       , emit: csv
     path "versions.yml", emit: versions
 
+    when:
+    task.ext.when == null || task.ext.when
+
     script: // This script is bundled with the pipeline, in {{ name }}/bin/
     """
     check_samplesheet.py \\