Skip to content

Issues: nf-core/rnafusion

Beta
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

33 Open 291 Closed
33 Open 291 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Missing output file(s) *.txt expected by process `RNAFUSION:QC_WORKFLOW:PICARD_COLLECTINSERTSIZEMETRICS (test) bug Something isn't working
#652 opened Apr 15, 2025 by atrigila 4.0.0
@nvnieuwk
4
Inconsistent Java error with singularity FusionCatcher container when running bbmap bug Something isn't working
#648 opened Apr 10, 2025 by tlaguna
Move subworkflows with less than 2 modules to the main workflow
#646 opened Apr 8, 2025 by rannick
Migrate local FUSIONREPORT_DETECT to nf-core/modules good first issue Good for newcomers
#630 opened Mar 14, 2025 by atrigila
@rachwalp
Migrate local FUSIONINSPECTOR_FUSIONINSPECTOR to nf-core/modules good first issue Good for newcomers
#629 opened Mar 14, 2025 by atrigila
1
@martings @alanmmobbs93
@sofiromano @delfiterradas
1
Migrate local CTATSPLICING_STARTOCANCERINTRONS to nf-core/modules good first issue Good for newcomers
#628 opened Mar 14, 2025 by atrigila
1
@anoronh4
5
Migrate local arriba/visualization to nf-core/modules good first issue Good for newcomers
#627 opened Mar 14, 2025 by atrigila
@mauro-saporita
Pipeline crashes when building references for tool starfusion bug Something isn't working
#621 opened Feb 24, 2025 by ReposGB
3
rnafusion using incorrect wget bug Something isn't working
#618 opened Feb 6, 2025 by dslarm 4.0.0
1
@rannick @nvnieuwk
single end, input fail fusion calling bug Something isn't working
#612 opened Jan 22, 2025 by charbel2998
1
Add in documentation where to find the references for ensembl 112
#606 opened Jan 7, 2025 by rannick 4.0.0
@rannick
reads_junction in STARFUSION_WORKFLOW should not join with reads
#595 opened Dec 20, 2024 by rannick
1
1
Create nf-test for STARFUSION_DETECT using a junction file as input
#593 opened Dec 19, 2024 by rannick
upload fusioncatcher 1.34 to quay.io/galaxy
#590 opened Dec 18, 2024 by rannick
@rannick
Use wave containers for fusioncatcher
#589 opened Dec 18, 2024 by rannick
@rannick
Create small reference for fusioncatcher (chr4)
#580 opened Dec 9, 2024 by alanmmobbs93
2
Move local modules to nf-core/modules
#575 opened Dec 6, 2024 by grst
Add small test data in test-datasets
#556 opened Nov 29, 2024 by atrigila
Correct language server issues
#552 opened Nov 28, 2024 by atrigila
Create nf-tests for "fusioninspector_workflow" subworkflow
#532 opened Nov 22, 2024 by nschcolnicov
Create nf-tests for "vcf_collect" module
#529 opened Nov 22, 2024 by nschcolnicov
5
Create nf-tests for "fusioncatcher": "detect" and "download" modules
#521 opened Nov 22, 2024 by nschcolnicov
4
Feed fusions separately to fusioninspector
#517 opened Nov 13, 2024 by rannick
@rannick
Add download options
#515 opened Nov 12, 2024 by rannick
@apeltzer @grst
@atrigila @rannick @alanmmobbs93 @nschcolnicov
9
Add cicero
#512 opened Nov 12, 2024 by rannick
ProTip! Type g p on any issue or pull request to go back to the pull request listing page.