This repository has been archived by the owner on May 6, 2024. It is now read-only.
Add archiving notice to README #420
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Run pipeline with test data in conda profile (and single-threaded)
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Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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The following artifacts were uploaded using a version of actions/upload-artifact that is scheduled for deprecation: "failed_logs", "nextflow.log", "test_dia_docker_results", "test_lfq_conda_results", "test_lfq_docker_results", "test_lfq_sage_conda_results", "test_lfq_sage_docker_results", "test_localize_docker_results", "test_tmt_conda_results", "test_tmt_docker_results".
Please update your workflow to use v4 of the artifact actions.
Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
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