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Fix compatibility with Pandas 1.5.0 #1050

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merged 1 commit into from
Sep 19, 2022
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@tsibley tsibley commented Sep 19, 2022

Pandas 1.5.0 was released earlier this morning and moved an exception class we use. Routine CI caught this backwards-incompatible change affecting our error handling for augur filter --query … evaluation.

I audited for usage of other exceptions moved in the same upstream change (as noted in the release notes) and found none in Augur.

Resolves: #1049
Related-to: pandas-dev/pandas#27656

@tsibley tsibley requested a review from a team September 19, 2022 21:06
Pandas 1.5.0 was released earlier this morning and moved an exception
class we use.  Routine CI caught this backwards-incompatible change
affecting our error handling for `augur filter --query …` evaluation.

I audited for usage of other exceptions moved in the same upstream
change (as noted in the release notes) and found none in Augur.

Resolves: <#1049>
Related-to: <pandas-dev/pandas#27656>
@tsibley tsibley force-pushed the trs/pandas-1.5.0-compat branch from 14a9404 to 0194b94 Compare September 19, 2022 21:11
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codecov bot commented Sep 19, 2022

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 61.74%. Comparing base (14a9404) to head (0194b94).
Report is 1215 commits behind head on master.

Additional details and impacted files
@@           Coverage Diff           @@
##           master    #1050   +/-   ##
=======================================
  Coverage   61.74%   61.74%           
=======================================
  Files          52       52           
  Lines        6297     6297           
  Branches     1584     1584           
=======================================
  Hits         3888     3888           
  Misses       2138     2138           
  Partials      271      271           

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@tsibley tsibley merged commit ce74c9b into master Sep 19, 2022
@tsibley tsibley deleted the trs/pandas-1.5.0-compat branch September 19, 2022 21:26
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Breaking changes in pandas 1.5.0
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