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Suggested change by @pditommaso
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Signed-off-by: Phil Ewels <[email protected]>
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ewels authored Dec 4, 2024
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Expand Up @@ -539,8 +539,8 @@ See the AWS documentation for details how to create the required AWS Batch queue
and the Batch Execution Role.

:::{note}
This feature requires the use {ref}`Wave <wave-page>` container provisioning service.
This is because `s5cmd` is used to stage and unstage data which is augmented into the task container via wave.
Nextflow uses the [s5cmd](https://github.com/peak/s5cmd) to download the task input data and upload the task outputs.
To allow this capability in your pipeline, you need to enable the Wave service in the Nextflow configuration, as shown in the above example. See {ref}Wave <wave-page> documentation for more details.
:::

## Advanced configuration
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