Fix typos [ci fast]

Signed-off-by: Paolo Di Tommaso <[email protected]>
nextflow-io · Oct 5, 2023 · 834c27d · 834c27d
1 parent e044b7a
commit 834c27d
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Showing 5 changed files with 6 additions and 6 deletions.
diff --git a/.codespellrc b/.codespellrc
@@ -3,4 +3,4 @@ skip = .git,*.pdf,*.svg,timeline-expected.html,*.fq,*.min.js,ScriptDslTest.groov
 # some cases where we need to catch using regex
 ignore-regex = \bhel\*|fo\\
 # some variables, names, etc to ignore
-ignore-words-list = splitted,ois,tre,marge,smoot,afile,bams,bais
+ignore-words-list = splitted,ois,tre,marge,smoot,afile,bams,bais,pre-pending,re-use
diff --git a/changelog.txt b/changelog.txt
@@ -16,7 +16,7 @@ NEXTFLOW CHANGE-LOG
 - Document when process directives are evaluated (#4217) [731a29a2]
 - Fix List of S3 bucket for custom endpoint [4327fa58]
 - Fix Prevent false positive resumable task [144e0a8a]
-- Fix Prevent multi attempts to retrive AWS creds [b30efe36]
+- Fix Prevent multi attempts to retrieve AWS creds [b30efe36]
 - Fix allow_other vulnerability preventing google-batch submissions (#4332) [9b3741e3]
 - Fix fs list command [29ab2f24]
 - Fix minor typos in changelogs/source code (#4319) [4ce9f1df]

diff --git a/modules/nextflow/src/main/groovy/nextflow/splitter/AbstractSplitter.groovy b/modules/nextflow/src/main/groovy/nextflow/splitter/AbstractSplitter.groovy
@@ -180,7 +180,7 @@ abstract class AbstractSplitter<T> implements SplitterStrategy {
      *      A non-empty list of objects
      * @return
      *      Returns the item at position defined by the attribute {@code #elem} in the list specified as parameter.
-     *      When {@code #elem} is equal to -1 find find out the first occourence of a file object.
+     *      When {@code #elem} is equal to -1 find find out the first occurrence of a file object.
      *      If no file is available the first item in the list is returned
      */
     @PackageScope

diff --git a/modules/nextflow/src/test/groovy/nextflow/util/LoggerHelperTest.groovy b/modules/nextflow/src/test/groovy/nextflow/util/LoggerHelperTest.groovy
@@ -79,7 +79,7 @@ class LoggerHelperTest extends Specification {
         def message =
                 """
                 startup failed:
-                _nf_script_c9a99616: 3: Unknown process block definition: `outpu` @ line 3, column 4.
+                _nf_script_c9a99616: 3: Unknown process block definition: `output` @ line 3, column 4.
                 stdout() into (A,B,C)
                 """
                 .stripIndent().leftTrim()
@@ -88,7 +88,7 @@ class LoggerHelperTest extends Specification {
         expect:
         LoggerHelper.formatStartupErrorMessage(message) ==
                 """
-                Unknown process block definition: `outpu` @ line 3, column 4.
+                Unknown process block definition: `output` @ line 3, column 4.
                 stdout() into (A,B,C)
                 """
                 .stripIndent().leftTrim()

diff --git a/plugins/nf-amazon/changelog.txt b/plugins/nf-amazon/changelog.txt
@@ -4,7 +4,7 @@ nf-amazon changelog
 - Fix minor typos in changelogs/source code (#4319) [4ce9f1df]
 - Fix List of S3 bucket for custom endpoint [4327fa58]
 - Fix support for S3 custom endpoint with anonymous access [03752815]
-- Fix Prevent multi attempts to retrive AWS creds [b30efe36]
+- Fix Prevent multi attempts to retrieve AWS creds [b30efe36]
 
 2.1.2 - 10 Sep 2023
 - Disable staging script for remote work dir (#4282) [80f7cd46]