New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Column `cell_type` is not found. Run `rlang::last_trace()` to see where the error occurred. #64

Open

tsjzz opened this issue Oct 16, 2024 · 0 comments

tsjzz commented Oct 16, 2024

DE = run_de(scrna_final, de_family = 'pseudobulk', de_method = 'DESeq2', de_type = 'LRT',cell_type_col = "label",label_col = "label",replicate_col = "orig.ident")
[1] "HF"
[1] "WT"
Error in group_by():
! Must group by variables found in .data.
✖ Column cell_type is not found.
Run rlang::last_trace() to see where the error occurred.

The text was updated successfully, but these errors were encountered:

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment