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installation docs
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ncherric committed Aug 11, 2023
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14 changes: 7 additions & 7 deletions docs/getting_started/installation.rst
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Expand Up @@ -121,16 +121,16 @@ Install Singularity

.. code-block:: console
$ export VERSION=3.8.7 && \ # adjust this as necessary
wget https://github.com/apptainer/singularity/releases/download/v${VERSION}/singularity-${VERSION}.tar.gz && \
tar -xzf singularity-${VERSION}.tar.gz && \
cd singularity-${VERSION}
$ export VERSION=3.8.7 # adjust this as necessary
$ wget https://github.com/apptainer/singularity/releases/download/v${VERSION}/singularity-${VERSION}.tar.gz
$ tar -xzf singularity-${VERSION}.tar.gz
$ cd singularity-${VERSION}
.. code-block:: console
$ ./mconfig && \
make -C ./builddir && \
sudo make -C ./builddir install
$ ./mconfig
$ make -C ./builddir
$ sudo make -C ./builddir install
Make sure Singularity is in your PATH and accessible by Snakemake.

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