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  1. broadinstitute/Drop-seq broadinstitute/Drop-seq Public

    Java tools for analyzing Drop-seq data

    Java 120 34

  2. rajewsky-lab/SPACEGERM rajewsky-lab/SPACEGERM Public archive

    SPACEGERM shiny app (archived, see GitLab for active fork)

    R

  3. rajewsky-lab/find_circ2 rajewsky-lab/find_circ2 Public

    Find circRNAs in RNA-seq data.

    Python 14 6

  4. rajewsky-lab/mirdeep2 rajewsky-lab/mirdeep2 Public

    Discovering known and novel miRNAs from small RNA sequencing data

    Perl 140 49

  5. BIMSBbioinfo/ciRcus BIMSBbioinfo/ciRcus Public

    An R package for annotation of circular RNAs

    R 10 5

  6. microSNPscore microSNPscore Public archive

    mirSVR-based tool to predict the effects of SNPs on miRNA:target interactions [migrated to gitlab]

    C++