[pre-commit.ci] pre-commit autoupdate

.pre-commit-config.yaml

@@ -1,6 +1,6 @@
 repos:
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.4.9
+    rev: v0.4.10
     hooks:
       - id: ruff
       - id: ruff-format

recipes/mne-python/construct.yaml

@@ -74,7 +74,7 @@ specs:
   # For testing purposes with build_local.sh, you can comment out all deps
   # below for speed, and change mne to mne-base above
   - mne-bids =0.15.0
-  - mne-bids-pipeline =1.8.0
+  - mne-bids-pipeline =1.9.0
   - mne-qt-browser =0.6.3
   - mne-connectivity =0.7.0
   - mne-faster =1.2
@@ -92,9 +92,10 @@ specs:
   - pyriemann =0.6
   - pyprep =0.4.3
   - openmeeg =2.5.11
-  - python-neo =0.13.0
+  - python-neo =0.13.1
   - pandas =2.2.2
   # BLAS
+  - scipy =1.13.1
   - openblas =0.3.27
   - libblas =3.9.0=*openblas
   - jupyter =1.0.0
@@ -135,7 +136,7 @@ specs:
   # various biological signals (ECG, EOG, EMG, …)
   - neurokit2 =0.2.9
   # GitHub client, https://cli.github.com
-  - gh =2.51.0
+  - gh =2.52.0
   # NeuroSpin needs the following
   - questionary =2.0.1
   - pqdm =0.2.0
@@ -149,8 +150,8 @@ specs:
   - make =4.3  # [win]
   - ipywidgets =8.1.3
   - pyvista =0.43.10
-  - pyvistaqt =0.11.0
-  - trame =3.6.2
+  - pyvistaqt =0.11.1
+  - trame =3.6.3
   - trame-vtk =2.8.9
   - trame-vuetify =2.6.0
   - termcolor =2.4.0
@@ -163,25 +164,25 @@ specs:
   - pytest-qt =4.4.0
   - pytest-timeout =2.3.1
   - pre-commit =3.7.1
-  - ruff =0.4.9
+  - ruff =0.4.10
   - check-manifest =0.49.0
   - codespell =2.3.0
   - nitime =0.10.2
   - py-spy =0.3.14
   - line_profiler =4.1.1
   - memory_profiler =0.61.0
   - twine =5.1.0
-  - hatchling =1.24.2
+  - hatchling =1.25.0
   - hatch-vcs =0.4.0
-  - mypy =1.10.0
+  - mypy =1.10.1
   - towncrier =23.11.0
   - vulture =2.7
   # Doc building
   - numpydoc =1.7.0
   - pydata-sphinx-theme =0.15.3
   - graphviz =9.0.0
   - python-graphviz =0.20.3
-  - selenium =4.21.0
+  - selenium =4.22.0
   - sphinx =7.2.6
   - sphinx-design =0.6.0
   - sphinx-gallery =0.16.0

tests/test_outdated.py

@@ -45,6 +45,9 @@ class Package:  # noqa: D101
     "mne-rsa",  # 0.91 appeared on conda-forge and was yanked
     "pyobjc-core",  # 10.3 conflicted with pyobjc-framework-cocoa on 2024/05/28
     "vtk",  # 9.3.0 is out but mayavi (at least) hasn't been migrated
+    "numba",  # conflicts with VTK 9.2.6
+    # https://github.com/raphaelvallat/yasa/pull/171
+    "scipy",  # 1.14 drops a function used by yasa
 }
 packages: list[Package] = []