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Thanks for the report. I'll fix this ASAP, and include the fix in all cases where a file is written by the host OS, and read in the Docker image (I suspect that is the incompatibility here)
the run.sh will fail in the docker container in a windows environment if newline='\n' is not included in the call.
with open(os.path.join(work_dir, "run.sh"), "wt", newline='\n') as f:
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