maragkakislab
Tools developed by the Maragkakis lab. These tools are made available here without any guarantee of support
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Showing 10 of 13 repositories
- nanoplen Public
Package for the analysis of the nanopore read lengths, e.g. to calculate the significant differential transcript length.
maragkakislab/nanoplen’s past year of commit activity - rnakinet Public
RNAkinet: Detect 5eu-modified reads directly from the raw nanopore sequencing signal to quantify RNA kinetics
maragkakislab/rnakinet’s past year of commit activity - wf-module-ensembl Public
A snakemake workflow that is intended to be consumed by other workflows allowing download of ENSEMBL reference files
maragkakislab/wf-module-ensembl’s past year of commit activity - wf-module-dorado Public
A snakemake workflow that is intended to be consumed by other workflows allowing basecalling of Oxford Nanopore files with dorado
maragkakislab/wf-module-dorado’s past year of commit activity - rnakinet-pub Public
maragkakislab/rnakinet-pub’s past year of commit activity - senescence-omics Public
Source code for manuscript "Senescence-specific translation dysregulation desensitizes cells to stress by inhibiting activation of the integrated stress response"
maragkakislab/senescence-omics’s past year of commit activity
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