This code accompanies the publication Aman, A., Saunders, L. et al., eLife (2023) and contains key analyses and code to generate all plots related to the sci-RNA-seq data in the paper.
The data to run all of this code is available in the data directory here or via our GEO repository under accession number GSE224695.
Our data includes whole-skin, single nucleus transcriptome data from four different genotypes and treatments in post-embryonic zebrafish: 1. wild type 2. Eda mutants 3. Bnc2 mutants 4. Hypothyroid fish (via embryonic thryoid gland ablation)
This project is licensed under the MIT License.