Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

(feat): try anndata + dask #13

Open
wants to merge 5 commits into
base: main
Choose a base branch
from

Conversation

ilan-gold
Copy link
Contributor

This would be great to try out. Blocked right now by the upper bound on anndata from lamin. See: https://anndata.readthedocs.io/en/latest/generated/anndata.experimental.read_elem_as_dask.html for what I've added here. To get the needed version of anndata + cluster management from dask, run pip install --pre anndata[dask] dask[distributed]

Would be great to see the results!

@falexwolf
Copy link
Member

Cool! :D

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants