Releases: koesterlab/microphaser
Releases · koesterlab/microphaser
v0.8.0
- harmonizes
--unsupported-allele-warning-only
command line option spelling with internal variable names - ensures aborting execution when encountering an unsupported allele type, unless the
--unsupported-allele-warning-only
option is set - introduces a check if gene records in the input GTF are in the correct order (including a test case for both correct and incorrect ordering, to avoid regressions)
v0.7.0
- print out peptide sequences in microphaser filter TSV output
v0.6.0
- fix: always write out microphaser filter TSV output header, even if no records written (uses the
struct-field-names-as-array
crate to access the field names of the respectivestruct FilteredRecord
that is used for writing the respective output)
v0.5.0
- fix: properly handle
<DEL>
alt alleles, error or warn on other<something>
alt alleles (by default, an error is thrown; it can be turned off with the-u/--unsupported-alleles-warning-only
flag to simply skip those)
Update in allelic frequency computation
This release updates the allelic frequency estimation using a new PMF and adds the computation of the 95% credible interval for every estimated frequency.
Version 0.3.0
This release incorporates updates in the CLI and fixes some errors in the usage descriptions.
- Added stdout to function
build_reference
- Added new custom usage messages
- Updated REAMDE.md
- Activated a new testcase for
build_reference
Version 0.2.0
- Updated Cargo.toml
- Improved handling of Frameshifts
- General updates after extensive testing and usage on multiple datasets