RISE slideshow notebook for BIDS presentation at 2018 CBU Open Science Day. A video recording of the talk is also available.
This notebook first introduces BIDS, including basic interfacing with BIDS data using pybids. The second half of the presentation is an interactive tutorial of dcm2bids, a tool for converting MRI DICOM data to the BIDS format.
Consider whether you can live with the mybinder version linked above, which includes all dependencies.
For a local install, see environment.yml for the conda environment. You will also need to activate some notebook extensions, install one linux package (tree), and one node.js package (bids-validator). To see how this is done, consult the Binder build files apt.txt and postBuild.
At CBU, conda activate neuroconda_1_4 should work.