CI - with Numpy/Scipy nightly wheels (nightly) #46
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: CI - with Numpy/Scipy nightly wheels (nightly) | |
| # This configures a github action that runs the JAX test suite against nightly development builds | |
| # of numpy and scipy, in order to catch issues with new package versions prior to their release. | |
| # Unlike our other CI, this is one that we expect to fail frequently, and so we don't run it against | |
| # every commit and PR in the repository. Rather, we run it on a schedule, and failures lead to an | |
| # issue being created or updated. | |
| # Portions of this adapted from https://github.com/pydata/xarray/blob/main/.github/workflows/upstream-dev-ci.yaml | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| on: | |
| schedule: | |
| - cron: "0 12 * * *" # Daily at 12:00 UTC | |
| workflow_dispatch: # allows triggering the workflow run manually | |
| pull_request: # Automatically trigger on pull requests affecting this file | |
| branches: | |
| - main | |
| paths: | |
| - '**workflows/upstream-nightly.yml' | |
| jobs: | |
| upstream-dev: | |
| runs-on: ubuntu-20.04-16core | |
| permissions: | |
| contents: read | |
| checks: write # for upload-artifact | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.12"] | |
| outputs: | |
| artifacts_availability: ${{ steps.status.outputs.ARTIFACTS_AVAILABLE }} | |
| steps: | |
| - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # ratchet:actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d # ratchet:actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install JAX test requirements | |
| run: | | |
| pip install -r build/test-requirements.txt | |
| pip install pytest-reportlog | |
| - name: Install numpy & scipy development versions | |
| run: | | |
| pip install \ | |
| -i https://pypi.anaconda.org/scientific-python-nightly-wheels/simple \ | |
| --no-deps \ | |
| --pre \ | |
| --upgrade \ | |
| numpy \ | |
| scipy | |
| python -c "import numpy; print(f'{numpy.__version__=}')" | |
| python -c "import scipy; print(f'{scipy.__version__=}')" | |
| - name: Install JAX | |
| run: | | |
| pip install .[ci] | |
| - name: Run tests | |
| if: success() | |
| id: status | |
| env: | |
| JAX_NUM_GENERATED_CASES: 1 | |
| JAX_ENABLE_X64: true | |
| JAX_ENABLE_CHECKS: true | |
| JAX_SKIP_SLOW_TESTS: true | |
| PY_COLORS: 1 | |
| run: | | |
| echo "JAX_NUM_GENERATED_CASES=$JAX_NUM_GENERATED_CASES" | |
| echo "JAX_ENABLE_X64=$JAX_ENABLE_X64" | |
| echo "JAX_ENABLE_CHECKS=$JAX_ENABLE_CHECKS" | |
| echo "JAX_SKIP_SLOW_TESTS=$JAX_SKIP_SLOW_TESTS" | |
| pytest -n auto --tb=short -rf --maxfail=20 \ | |
| --report-log output-${{ matrix.python-version }}-log.jsonl \ | |
| tests \ | |
| || ( | |
| echo 'ARTIFACTS_AVAILABLE=true' >> $GITHUB_OUTPUT && false | |
| ) | |
| - name: Upload artifacts | |
| if: | | |
| failure() | |
| && steps.status.outcome == 'failure' | |
| && github.event_name == 'schedule' | |
| && github.repository == 'google/jax' | |
| uses: actions/upload-artifact@65462800fd760344b1a7b4382951275a0abb4808 # ratchet: actions/upload-artifact@v4 | |
| with: | |
| name: output-${{ matrix.python-version }}-log.jsonl | |
| path: output-${{ matrix.python-version }}-log.jsonl | |
| retention-days: 5 | |
| report: | |
| name: report | |
| needs: upstream-dev | |
| permissions: | |
| contents: read | |
| issues: write | |
| if: | | |
| failure() | |
| && github.event_name == 'schedule' | |
| && needs.upstream-dev.outputs.artifacts_availability == 'true' | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash | |
| steps: | |
| - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # ratchet:actions/checkout@v4 | |
| - uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d # ratchet:actions/setup-python@v5 | |
| with: | |
| python-version: "3.x" | |
| - uses: actions/download-artifact@65a9edc5881444af0b9093a5e628f2fe47ea3b2e # ratchet:actions/download-artifact@v4 | |
| with: | |
| path: /tmp/workspace/logs | |
| - name: install requirements | |
| run: | | |
| python -m pip install pytest | |
| - name: Move all log files into a single directory | |
| run: | | |
| rsync -a /tmp/workspace/logs/output-*/ ./logs | |
| ls -R ./logs | |
| cat logs/*.jsonl > pytest-logs.txt | |
| python .github/workflows/parse_logs.py pytest-logs.txt --outfile=parsed-logs.txt | |
| - name: Report failures | |
| uses: actions/github-script@60a0d83039c74a4aee543508d2ffcb1c3799cdea # ratchet:actions/github-script@v7 | |
| with: | |
| github-token: ${{ secrets.GITHUB_TOKEN }} | |
| script: | | |
| const fs = require('fs'); | |
| const parsed_logs = fs.readFileSync('parsed-logs.txt', 'utf8'); | |
| const title = "⚠️ Nightly upstream-dev CI failed ⚠️" | |
| const workflow_url = `https://github.com/${process.env.GITHUB_REPOSITORY}/actions/runs/${process.env.GITHUB_RUN_ID}` | |
| const issue_body = `[Workflow Run URL](${workflow_url})\n${parsed_logs}` | |
| // Run GraphQL query against GitHub API to find the most recent open issue used for reporting failures | |
| const query = `query($owner:String!, $name:String!, $creator:String!, $label:String!){ | |
| repository(owner: $owner, name: $name) { | |
| issues(first: 1, states: OPEN, filterBy: {createdBy: $creator, labels: [$label]}, orderBy: {field: CREATED_AT, direction: DESC}) { | |
| edges { | |
| node { | |
| body | |
| id | |
| number | |
| } | |
| } | |
| } | |
| } | |
| }`; | |
| const variables = { | |
| owner: context.repo.owner, | |
| name: context.repo.repo, | |
| label: 'CI', | |
| creator: "github-actions[bot]" | |
| } | |
| const result = await github.graphql(query, variables) | |
| // If no issue is open, create a new issue, | |
| // else update the body of the existing issue. | |
| if (result.repository.issues.edges.length === 0) { | |
| github.rest.issues.create({ | |
| owner: variables.owner, | |
| repo: variables.name, | |
| body: issue_body, | |
| title: title, | |
| labels: [variables.label] | |
| }) | |
| } else { | |
| github.rest.issues.update({ | |
| owner: variables.owner, | |
| repo: variables.name, | |
| issue_number: result.repository.issues.edges[0].node.number, | |
| body: issue_body | |
| }) | |
| } |