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1. dix-seq dix-seq Public

   Dix-seq: An integrated pipeline for fast amplicon data analysis

   Perl 8

2. atlas-utils atlas-utils Public

   tools for microbiome data analysis

   C 6 2

3. plasmids-inspect plasmids-inspect Public

   Mining and annotation plasmids contigs and AMR genes from metagenome datasets

   Perl 1

4. biostack-suits biostack-suits Public

   utils for building pipelines

   Perl 1 1

5. denoise-kit denoise-kit Public

   denoise amplicon sequencing data with USEARCH unoise3

   Perl

6. ncbi-kit ncbi-kit Public

   Download NCBI assembly genomes with ftp. rsync, ascp

   Perl 10