Add script for cropping the images around the SC #62
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…und the spinal cord segmentation (based on the dilated spinal cord GT)
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Discussed in-person with @naga-karthik --> merging. |
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This PR adds a
crop_around_sc.shscript for cropping of the input images, spinal cord GT, and lesion GT around the spinal cord. The cropping is done based on the dilated spinal cord GT.