Code

Fetch sequence parameters#58

Code

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naga-karthik merged 12 commits intomainivadomed/model_seg_sci:mainfrom jv/fetch_sequence_parametersivadomed/model_seg_sci:jv/fetch_sequence_parametersCopy head branch name to clipboardAug 30, 2023

+174

Commits

Commits on Aug 29, 2023

• Add script to fetch sequence parameters from JSON sidecars

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• Add final print

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Commits on Aug 30, 2023

• - Print the min and max values of the MagneticFieldStrength, PixelSpacing, and SliceThickness

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• Print number of filenames for unique values of the Manufacturer

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• Print number of filenames for unique values of the MagneticFieldStrength

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• Add check if JSON is empty

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• Make script working also for sci-colorado (it has different structure of JSON sidecars)

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• Read PixDim and SliceThickness from nii header instead of JSON sidecar

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• Fix summary printing

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• Make the script working also for sci-paris -- we do not have JSON sidecars --> we can fetch only PixDim and SliceThickness from nii header

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• Add example usage

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• Update description

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