revert to CFITSIO for table i/o

The libtbtables.a was changed in v2.16 to use SPP fitsio from earlier uses
of the fortran version under the assumption that they were equivalent.
However, there is a bug in the fortran version of ftdrow() when called
by the TDIFFER task in which the output table doesn't have its NAXIS2
value properly updated for FITS tables causing the task to exit.  The
cfitsio code acknowledges the value may not be correct and so uses an
internal data structure value for the 'nrows' rather than the keyword,
but equivalent functionality does not exist in the fortran version.  A
similar problem exists when inserting rows but this is not called from
any existing NTTOOLS tasks.

This change fixes a bug in the GEMINI.GSEEING task which is the only
task known to call TDIFFER.

pkg/tbtables/cfitsio/Licence.txt

@@ -0,0 +1,46 @@
+Copyright (Unpublished--all rights reserved under the copyright laws of
+the United States), U.S. Government as represented by the Administrator
+of the National Aeronautics and Space Administration.  No copyright is
+claimed in the United States under Title 17, U.S. Code.
+
+Permission to freely use, copy, modify, and distribute this software
+and its documentation without fee is hereby granted, provided that this
+copyright notice and disclaimer of warranty appears in all copies.
+(However, see the restriction on the use of the gzip compression code,
+below).
+
+DISCLAIMER:
+
+THE SOFTWARE IS PROVIDED 'AS IS' WITHOUT ANY WARRANTY OF ANY KIND,
+EITHER EXPRESSED, IMPLIED, OR STATUTORY, INCLUDING, BUT NOT LIMITED TO,
+ANY WARRANTY THAT THE SOFTWARE WILL CONFORM TO SPECIFICATIONS, ANY
+IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR
+PURPOSE, AND FREEDOM FROM INFRINGEMENT, AND ANY WARRANTY THAT THE
+DOCUMENTATION WILL CONFORM TO THE SOFTWARE, OR ANY WARRANTY THAT THE
+SOFTWARE WILL BE ERROR FREE.  IN NO EVENT SHALL NASA BE LIABLE FOR ANY
+DAMAGES, INCLUDING, BUT NOT LIMITED TO, DIRECT, INDIRECT, SPECIAL OR
+CONSEQUENTIAL DAMAGES, ARISING OUT OF, RESULTING FROM, OR IN ANY WAY
+CONNECTED WITH THIS SOFTWARE, WHETHER OR NOT BASED UPON WARRANTY,
+CONTRACT, TORT , OR OTHERWISE, WHETHER OR NOT INJURY WAS SUSTAINED BY
+PERSONS OR PROPERTY OR OTHERWISE, AND WHETHER OR NOT LOSS WAS SUSTAINED
+FROM, OR AROSE OUT OF THE RESULTS OF, OR USE OF, THE SOFTWARE OR
+SERVICES PROVIDED HEREUNDER.
+
+The file compress.c contains (slightly modified) source code that
+originally came from gzip-1.2.4, copyright (C) 1992-1993 by Jean-loup
+Gailly.  This gzip code is distributed under the GNU General Public
+Licence and thus requires that any software that uses the CFITSIO
+library (which in turn uses the gzip code) must conform to the
+provisions in the GNU General Public License.  A copy of the GNU
+licence is included at the beginning of compress.c file.
+
+An alternate version of the compress.c file (called compress_alternate.c)
+is provided for users who want to use the CFITSIO library but are
+unwilling or unable to publicly release their software under the terms
+of the GNU General Public License.   This alternate version contains
+non-functional stubs for the file compression and uncompression
+routines used by CFITSIO.  Replace the file 'compress.c' with
+'compress_alternate.c' before compiling the CFITSIO library.  This will
+produce a version of CFITSIO which does not support reading or writing
+compressed FITS files but is otherwise identical to the standard
+version.

pkg/tbtables/cfitsio/Makefile.in

@@ -0,0 +1,145 @@
+#
+# Makefile for cfitsio library:
+#       libcfits.a
+#
+# Oct-96 : original version by 
+#
+#       JDD/WDP
+#       NASA GSFC
+#       Oct 1996
+#
+# 25-Jan-01 : removed conditional drvrsmem.c compilation because this
+#             is now handled within the source file itself.
+# 09-Mar-98 : modified to conditionally compile drvrsmem.c. Also
+# changes to target all (deleted clean), added DEFS, LIBS, added
+# DEFS to .c.o, added SOURCES_SHMEM and MY_SHMEM, expanded getcol*
+# and putcol* in SOURCES, modified OBJECTS, mv changed to /bin/mv
+# (to bypass aliasing), cp changed to /bin/cp, add smem and
+# testprog targets. See also changes and comments in configure.in
+#
+
+CFITSIO_LIB =	@CFITSIO_PREFIX@/lib
+CFITSIO_INCLUDE =	@CFITSIO_PREFIX@/include
+
+SHELL =		/bin/sh
+RANLIB =	@RANLIB@
+CC =		@CC@
+CFLAGS =	@CFLAGS@
+FC =		@FC@
+LDFLAGS =	$(CFLAGS)
+DEFS =		@DEFS@
+LIBS =		@LIBS@
+FLEX =		flex
+BISON =		bison
+
+SHLIB_LD =	@SHLIB_LD@
+SHLIB_SUFFIX =	@SHLIB_SUFFIX@
+
+.c.o:
+		$(CC) -c $(CFLAGS) $(DEFS) $<
+
+
+CORE_SOURCES = 	buffers.c cfileio.c checksum.c compress.c drvrfile.c drvrmem.c \
+		drvrnet.c drvrsmem.c editcol.c edithdu.c eval_l.c eval_y.c \
+		eval_f.c fitscore.c getcol.c getcolb.c getcold.c getcole.c \
+		getcoli.c getcolj.c getcolk.c getcoll.c getcols.c getcolsb.c \
+		getcoluk.c getcolui.c getcoluj.c getkey.c group.c grparser.c \
+		histo.c iraffits.c \
+		modkey.c putcol.c putcolb.c putcold.c putcole.c putcoli.c \
+		putcolj.c putcolk.c putcoluk.c putcoll.c putcols.c putcolsb.c \
+		putcolu.c putcolui.c putcoluj.c putkey.c region.c scalnull.c \
+		swapproc.c wcssub.c wcsutil.c imcompress.c quantize.c ricecomp.c \
+		pliocomp.c
+
+SOURCES = ${CORE_SOURCES} @F77_WRAPPERS@
+
+OBJECTS = 	${SOURCES:.c=.o}
+
+CORE_OBJECTS = 	${CORE_SOURCES:.c=.o}
+
+
+FITSIO_SRC =	f77_wrap1.c f77_wrap2.c f77_wrap3.c f77_wrap4.c
+
+# ============ description of all targets =============
+#       -  <<-- ignore error code
+
+all:
+		@if [ "x${FC}" = x ]; then \
+			${MAKE} all-nofitsio; \
+		else \
+			${MAKE} stand_alone; \
+		fi
+
+all-nofitsio:
+		${MAKE} stand_alone "FITSIO_SRC="
+
+stand_alone:	libcfitsio.a
+
+libcfitsio.a:	${OBJECTS}
+		ar rv libcfitsio.a ${OBJECTS}; \
+		${RANLIB} libcfitsio.a;
+
+shared: libcfitsio${SHLIB_SUFFIX}
+
+libcfitsio${SHLIB_SUFFIX}: ${OBJECTS}
+		${SHLIB_LD} -o $@ ${OBJECTS}
+
+install:	libcfitsio.a ${CFITSIO_LIB} ${CFITSIO_INCLUDE}
+		@if [ -f libcfitsio.a ]; then \
+			/bin/mv libcfitsio.a ${CFITSIO_LIB}; \
+		fi; \
+		if [ -f libcfitsio${SHLIB_SUFFIX} ]; then \
+			/bin/mv libcfitsio${SHLIB_SUFFIX} ${CFITSIO_LIB}; \
+		fi; \
+		/bin/cp fitsio.h fitsio2.h longnam.h drvrsmem.h ${CFITSIO_INCLUDE}/
+
+smem:		smem.o libcfitsio.a ${OBJECTS}
+		${CC} $(CFLAGS) $(DEFS) -o smem smem.o -L. -lcfitsio -lm
+
+testprog:	testprog.o libcfitsio.a ${OBJECTS}
+		${CC} $(CFLAGS) $(DEFS) -o testprog testprog.o -L. -lcfitsio -lm ${LIBS}
+
+fitscopy:	fitscopy.o libcfitsio.a ${OBJECTS}
+		${CC} $(CFLAGS) $(DEFS) -o fitscopy fitscopy.o -L. -lcfitsio -lm ${LIBS}
+
+speed:		speed.o libcfitsio.a ${OBJECTS}
+		${CC} $(CFLAGS) $(DEFS) -o speed speed.o -L. -lcfitsio -lm ${LIBS}
+
+imcopy:		imcopy.o libcfitsio.a ${OBJECTS}
+		${CC} $(CFLAGS) $(DEFS) -o imcopy imcopy.o -L. -lcfitsio -lm ${LIBS}
+
+listhead:	listhead.o libcfitsio.a ${OBJECTS}
+		${CC} $(CFLAGS) $(DEFS) -o listhead listhead.o -L. -lcfitsio -lm ${LIBS}
+
+cookbook:	cookbook.o libcfitsio.a ${OBJECTS}
+		${CC} $(CFLAGS) $(DEFS) -o cookbook cookbook.o -L. -lcfitsio -lm ${LIBS}
+
+eval:		# Rebuild eval_* files from flex/bison source
+		$(FLEX) -t eval.l > eval_l.c1
+		/bin/sed -e 's/yy/ff/g' -e 's/YY/FF/g' eval_l.c1 > eval_l.c
+		/bin/rm -f eval_l.c1
+		$(BISON) -d -v -y eval.y
+		/bin/sed -e 's/yy/ff/g' -e 's/YY/FF/g' y.tab.c > eval_y.c
+		/bin/sed -e 's/yy/ff/g' -e 's/YY/FF/g' y.tab.h > eval_tab.h
+		/bin/rm -f y.tab.c y.tab.h
+
+clean:
+	-	/bin/rm -f *.o libcfitsio.a libcfitsio${SHLIB_SUFFIX} \
+			smem testprog y.output
+
+distclean:	clean
+	-	/bin/rm -f Makefile config.*
+
+# Make target which outputs the list of the .o contained in the cfitsio lib
+# usefull to build a single big shared library containing Tcl/Tk and other
+# extensions.  used for the Tcl Plugin. 
+
+cfitsioLibObjs:
+	@echo ${CORE_OBJECTS}
+
+# This target actually builds the objects needed for the lib in the above
+# case
+objs: ${CORE_OBJECTS}
+
+${CFITSIO_LIB} ${CFITSIO_INCLUDE}:
+	@if [ ! -d $@ ]; then mkdir $@; fi

pkg/tbtables/cfitsio/README

@@ -0,0 +1,151 @@
+                   CFITSIO Interface Library
+
+CFITSIO is a library of ANSI C routines for reading and writing FITS
+format data files.  A set of Fortran-callable wrapper routines are also
+included for the convenience of Fortran programmers.  This README file
+gives a brief summary of how to build and test CFITSIO, but the CFITSIO
+User's Guide, found in the files cfitsio.doc (plain text), cfitsio.tex
+(LaTeX source file), or cfitsio.ps (postscript format), should be
+referenced for the latest and most complete information.
+
+BUILDING CFITSIO
+----------------
+
+The CFITSIO code is contained in about 40 *.c source files and several *.h
+header files.  The CFITSIO library is built on Unix systems by typing:
+
+ >  ./configure [--prefix=/target/installation/path]
+ >  make          (or  'make shared')
+ >  make install  (this step is optional)
+
+at the operating system prompt.  The configure command customizes the
+Makefile for the particular system, then the `make' command compiles the
+source files and builds the library.  Type `./configure' and not simply
+`configure' to ensure that the configure script in the current directory
+is run and not some other system-wide configure script.  The optional
+'prefix' argument to configure gives the path to the directory where
+the CFITSIO library and include files should be installed via the later
+'make install' command. For example,
+
+   > ./configure --prefix=/usr1/local
+
+will cause the 'make install' command to copy the CFITSIO libcfitsio file 
+to /usr1/local/lib and the necessary include files to /usr1/local/include
+(assuming of course that the  process has permission to write to these 
+directories).
+
+On VAX/VMS and ALPHA/VMS systems the make.com command file may be used
+to build the cfitsio.olb object library using the default G-floating
+point option for double variables.  The make\_dfloat.com and make\_ieee.com
+files may be used instead to build the library with the other floating
+point options.
+
+A precompiled DLL version of CFITSIO is available for IBM-PC users of
+the Borland or Microsoft Visual C++ compilers in the files
+cfitsiodll_2xxx_borland.zip and cfitsiodll_2xxx_vcc.zip, where '2xxx'
+represents the current release number.  These zip archives also
+contains other files and instructions on how to use the CFITSIO DLL
+library. The CFITSIO library may also be built from the source code
+using the makefile.bc or makefile.vcc  files.  Finally, the makepc.bat
+file gives an example of  building CFITSIO with the Borland C++ v4.5
+compiler using simpler DOS commands.
+
+On OS/2 systems, CFITSIO can be built using the supplied makefile by
+typing 'make -f makefile.os2'.  This makefile requires the GCC compiler
+and EMX library, which are available from many Internet sites
+containing OS/2 software, such as
+ftp-os2.nmsu.edu/pub/os2/dev/emx/v0.9c and
+ftp.leo.org/pub/comp/os/os2/leo/devtools/emx+gcc.
+
+When building on Mac OS-X, users should follow the Unix instructions,
+above. Previous MacOS versions of the cfitsio library can be built by
+(1) un binhex and unstuff cfitsio_mac.sit.hqx, (2) put CFitsioPPC.mcp
+in the cfitsio directory, and (3) load CFitsioPPC.mcp into CodeWarrior
+Pro 5 and make.  This builds the cfitsio library for PPC.  There are
+also targets for both the test program and the speed test program.
+
+To use the MacOS port you can add Cfitsio PPC.lib to your Codewarrior
+Pro 5 project.  Note that this only has been tested for the PPC and
+probably won't work
+ on 68k macs.
+
+TESTING CFITSIO
+---------------
+
+The CFITSIO library should be tested by building and running
+the testprog.c program that is included with the release. 
+On Unix systems, type:
+-
+    % make testprog
+    % testprog > testprog.lis
+    % diff testprog.lis testprog.out
+    % cmp testprog.fit testprog.std
+-
+ On VMS systems,
+(assuming cc is the name of the C compiler command), type:
+-
+    $ cc testprog.c
+    $ link testprog, cfitsio/lib
+    $ run testprog
+-
+The testprog program should produce a FITS file called `testprog.fit'
+that is identical to the testprog.std FITS file included in this
+release.  The diagnostic messages (which were piped to the file
+testprog.lis in the Unix example) should be identical to the listing
+contained in the file testprog.out.  The 'diff' and 'cmp' commands
+shown above should not report any differences in the files.
+
+USING CFITSIO
+-------------
+
+The CFITSIO User's Guide, contained in the files cfitsio.doc (plain
+text file) and cfitsio.ps (postscript file), provides detailed
+documentation about how to build and use the CFITSIO library.
+It contains a description of every user-callable routine in the
+CFITSIO interface.
+
+The cookbook.c file provides some sample routines for performing common
+operations on various types of FITS files.  Programmers are urged to
+examine these routines for recommended programming practices when using
+CFITSIO.  Users are free to copy or modify these routines for their own
+purposes.
+
+SUPPORTED PLATFORMS
+-------------------
+
+CFITSIO has currently been tested on the following platforms:
+
+   Operating System          Compiler
+   ----------------          --------
+  OPERATING SYSTEM           COMPILER
+   Sun OS                     gcc and cc (3.0.1)
+   Sun Solaris                gcc and cc
+   Silicon Graphics IRIX      gcc and cc
+   Silicon Graphics IRIX64    MIPS
+   Dec Alpha OSF/1            gcc and cc
+   DECstation  Ultrix         gcc
+   Dec Alpha OpenVMS          cc 
+   DEC VAX/VMS                gcc and cc
+   HP-UX                      gcc
+   IBM AIX                    gcc
+   Linux                      gcc
+   MkLinux                    DR3
+   Windows 95/98/NT           Borland C++ V4.5
+   Windows 95/98/NT/ME/XP     Microsoft/Compaq Visual C++ v5.0, v6.0
+   Windows 95/98/NT           Cygwin gcc
+   OS/2                       gcc + EMX
+   Mac OS 7.1 or greater      Metrowerks 10.+
+   Mac OS-X 10.1 or greater   cc (gcc)
+
+CFITSIO will probably run on most other Unix platforms without
+modification.  Cray supercomputers and IBM mainframe computers are
+currently not supported.
+
+Reports of any success or failure to run CFITSIO on other platforms
+would be appreciated.  Any problem reports or suggestions for
+improvements are also welcome and should be sent to the primary author.
+
+-------------------------------------------------------------------------
+William D. Pence
+[email protected]
+HEASARC, NASA/GSFC

pkg/tbtables/cfitsio/README.MacOS

@@ -0,0 +1,31 @@
+To build the CFITSIO library on Mac OS-X systems, follow the
+instructions for Unix platforms given in the CFITSIO User's Reference
+Guide (cfitsio.doc).
+
+To build the MacOS port on classic Mac OS-9 or earlier:
+
+1. Un binhex and unstuff cfitsio_mac.sit.hqx
+2. put CFitsioPPC.mcp in the cfitsio directory.
+2. Load CFitsioPPC.mcp into CodeWarrior Pro 5 and make.
+   This builds the cfitsio library for PPC.  There are also targets for both 
+   the test program and the speed test program.
+
+To use the MacOS port you can add Cfitsio PPC.lib to your Codewarrior Pro 5
+project.  Note that this only has been tested for the PPC. It probably
+won't work on 68k macs.  Also note that the fortran bindings aren't
+included.  I haven't worked with the codewarrior f2c plugin so I don't know
+how these would work.  If one is interested, please write and I can look
+into this.
+
+[email protected]
+
+Modifications...
+
+10/22/98:  [email protected]
+      New files added for project.  Converted to CodeWarrior Pro 3.
+      The speed test program does not run... complains about a missing library?
+11/09/98:  [email protected]
+      Fixed speed test problem thanks to Tom Andersen.
+07/17/00:  [email protected]
+      Updated to CodeWarrior Pro 5 and CFITSIO 2.037.
+