Remove deprecated protocol config parameters and disable unused upcoming features for now

[muXxer]

We need to remove deprecated protocol config parameters and possibly also code that is associated to those parameters.

## Remove the unused parameter
- [x] package_upgrades
- [x] scoring_decision_with_validity_cutoff
- [x] disallow_adding_abilities_on_upgrade
- [x] package_digest_hash_module
- [x] narwhal_versioned_metadata
- [x] upgraded_multisig_supported
- [x] narwhal_new_leader_election_schedule
- [x] receive_objects
- [x] narwhal_certificate_v2

## Remove the parameter and the associated logic in the code
- [x] commit_root_state_digest
- [x] advance_epoch_start_time_in_safe_mode
- [x] loaded_child_objects_fixed
- [x] missing_type_is_compatibility_error
- [x] consensus_order_end_of_epoch_last
- [x] ban_entry_init
- [x] disallow_change_struct_type_params_on_upgrade
- [x] simplified_unwrap_then_delete
- [x] txn_base_cost_as_multiplier
- [x] shared_object_deletion
- [x] loaded_child_object_format
- [x] end_of_epoch_transaction_supported
- [x] simple_conservation_checks
- [x] loaded_child_object_format_type
- [x] random_beacon
- [x] enable_effects_v2
- [x] verify_legacy_zklogin_address
- [x] recompute_has_public_transfer_in_execution
- [x] include_consensus_digest_in_prologue
- [x] allow_receiving_object_id
- [x] reject_mutable_random_on_entry_functions
- [x] reshare_at_same_initial_version
- [x] resolve_abort_locations_to_package_id
- [x] mysticeti_use_committed_subdag_digest
- [x] record_consensus_determined_version_assignments_in_prologue
- [x] fresh_vm_on_framework_upgrade
- [x] prepend_prologue_tx_in_consensus_commit_in_checkpoints
- [x] soft_bundle

## Further investigations needed if those parameters can be removed
- [x] 🚧 (Max) advance_to_highest_supported_protocol_version
- [x] 🚧 (Valerii) zklogin_supported_providers
- [x] 🚧 (Piotr) throughput_aware_consensus_submission
- [x] 🚧 (Valerii) enable_coin_deny_list
- [x] 🚧 (Valerii) enable_coin_deny_list_v2
- [x] 🚧 (Max) authority_capabilities_v2