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Fragmentation metrics (to measure fragmentation of rest and activity). Provide the codes for detrended fluctuation analysis (DFA), inter-daily stability (IS), intradaily variability (IV) and transition probability (TP).

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frag_metrics

Fragmentation of rest and activity metrics. Provide the codes for detrended fluctuation analysis (DFA), inter-daily stability (IS), intradaily variability (IV) and transition probability (TP).

The sequence of files:

to run an analysis:

f_DFA; f_IS_IV; f_TP;

to run a simulation:

f_MC MonteCarlo read_MC analyze_MC

References

Danilevicz, I.M., van Hees, V., van der Heide, F. et al. Measures of fragmentation of rest activity patterns: mathematical properties and interpretability based on accelerometer real life data. BMC Med Res Methodol 24, 132 (2024). https://doi.org/10.1186/s12874-024-02255-w

Danilevicz, I.M., Vidil, S., Landré, B. et al. Reliable measures of rest-activity rhythm fragmentation: how many days are needed?. Eur Rev Aging Phys Act 21, 29 (2024). https://doi.org/10.1186/s11556-024-00364-5

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Fragmentation metrics (to measure fragmentation of rest and activity). Provide the codes for detrended fluctuation analysis (DFA), inter-daily stability (IS), intradaily variability (IV) and transition probability (TP).

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