Add Docker Image and Checkpoint Package

This is a full release of the source code for the analysis pipeline presented in "Comprehensive cross-population analysis of high-grade serous ovarian cancer supports no more than three subtypes"

Full Release - Tothill LMP Analysis

1.2.1

minor changes and adding Tothill LMP analysis

Updating subtype reproducibility analyses

This release adds cophenetic correlation coefficient analyses to the NMF scripts to output supplemental figures used to describe the HGSC subtyping reproducibility of the findings reported by Tothill et al., TCGA, and Konecny et al.

Generate DOI under greenelab on github.

v1.1.1

Update LICENSE

Migrating repo to greenelab to update Zenodo DOI

v1.1

Update LICENSE

Submission Release

This is the first release of the code written for the analysis of high-grade serous ovarian cancer (HGSC) subtypes across populations. All code to reproduce the HGSC subtyping study is supplied here.