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Pull requests: galaxyproject/tools-iuc

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Pull requests list

add color palette to ampvis2 heatmap
#6130 opened Jul 7, 2024 by MaraBesemer Loading…
1 of 5 tasks
use TMPDIR for lumpy
#6129 opened Jul 7, 2024 by bgruening Loading…
5 tasks
2
Update DiffBind to 3.12.0 and add some requested features
#6125 opened Jul 3, 2024 by pavanvidem Loading…
3 of 5 tasks
10
Quick fix for fastq-dump reads name issue
#6123 opened Jul 3, 2024 by diegomics Loading…
1
Updating tools/rnaquast from version 2.2.3 to 2.3.0
#6119 opened Jul 1, 2024 by gxydevbot Loading…
Updating tools/picard from version 3.1.1 to 3.2.0
#6118 opened Jul 1, 2024 by gxydevbot Loading…
Updating tools/ncbi_fcs_gx from version 0.5.0 to 0.5.4
#6117 opened Jul 1, 2024 by gxydevbot Loading…
Add Single Cell category to all single-cell tools
#6114 opened Jun 29, 2024 by pavanvidem Loading…
2 of 5 tasks
Scanpy plot new function
#6113 opened Jun 28, 2024 by heylf Loading…
3 of 5 tasks
2
Create combined markdown report in weekly CI
#6106 opened Jun 24, 2024 by bernt-matthias Loading…
5 tasks
2
Updating tools/metabat2 from version 2.15 to 2.17
#6105 opened Jun 24, 2024 by gxydevbot Loading…
Updating tools/cutadapt from version 4.8 to 4.9
#6104 opened Jun 24, 2024 by gxydevbot Loading…
2
VirHEAT: fix error when no .vcf in samplename
#6103 opened Jun 21, 2024 by PlushZ Loading…
3 of 5 tasks
1
Added Cami Opal - A tool for evaluating taxonomic metagenome profilers
#6096 opened Jun 19, 2024 by Alby-Git Loading…
3 of 5 tasks
33
Updating tools/humann from version 3.8 to 3.9
#6091 opened Jun 17, 2024 by gxydevbot Loading…
Added the profile2cami tool, a component of the TaxonKit suite.
#6085 opened Jun 14, 2024 by Alby-Git Loading…
3 of 5 tasks
23
Added tests to fetch genome all fasta dbkeys data manager
#6083 opened Jun 14, 2024 by profgiuseppe Loading…
4 of 5 tasks
Update Stringtie wrapper to expose the -s option (and change tests)
#6080 opened Jun 12, 2024 by lldelisle Loading…
3 of 5 tasks
2
Updating tools/snapatac2 from version 2.5.3 to 2.6.4
#6072 opened Jun 10, 2024 by gxydevbot Loading…
Updating tools/integron_finder from version 2.0.3 to 2.0.5
#6070 opened Jun 10, 2024 by gxydevbot Loading…
Updating tools/funannotate from version 1.8.15 to 1.8.17
#6069 opened Jun 10, 2024 by gxydevbot Loading…
Added tool Sylph
#6059 opened Jun 6, 2024 by tcollins2011 Loading…
2 tasks
3
Column-join: fix fill character for files containing only a header
#6054 opened Jun 5, 2024 by RZ9082 Loading…
2 of 5 tasks
3
Updating tools/vcf2maf from version 1.6.21 to 1.6.22
#6047 opened Jun 3, 2024 by gxydevbot Loading…
Groot new tool and data manager
#6043 opened May 31, 2024 by hugolefeuvre Loading…
3 of 5 tasks
4
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