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fix(runall): honor --extract::no-check-crc on BGZF FASTQ input - #996

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nh13 merged 1 commit into
mainfrom
nh/fix-runall-fastq-check-crc
Sep 29, 2026
Merged

nh13 merged 1 commit into
mainfrom
nh/fix-runall-fastq-check-crc

fix(runall): honor --extract::no-check-crc on BGZF FASTQ input

fd74432
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Codecov / codecov/project succeeded Sep 29, 2026 in 1s

96.27% (-0.02%) compared to 27c3a4f

View this Pull Request on Codecov

96.27% (-0.02%) compared to 27c3a4f

Details

Codecov Report

❌ Patch coverage is 96.66667% with 1 line in your changes missing coverage. Please review.
✅ Project coverage is 96.27%. Comparing base (27c3a4f) to head (fd74432).

Files with missing lines Patch % Lines
src/lib/pipeline/chains/builder.rs 96.00% 1 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##             main     #996      +/-   ##
==========================================
- Coverage   96.29%   96.27%   -0.02%     
==========================================
  Files         296      296              
  Lines      149023   149032       +9     
==========================================
- Hits       143496   143475      -21     
- Misses       5527     5557      +30     

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