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fix(runall/align): accept bwa's mid-pair -K split; emit BAM from the bwa-mem3 preset; keep mimalloc from purging - #988

Merged
nh13 merged 2 commits into
mainfrom
nh/subprocess-align-fixes
Sep 30, 2026
Merged

nh13 merged 2 commits into
mainfrom
nh/subprocess-align-fixes

Commits

  1. Commits on Sep 29, 2026