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fix(dedup)!: report per-reason filtered template counts - #740

Merged

nh13 merged 8 commits into

mainfrom

739/nhomer/template-filter-metrics

Aug 13, 2026

Commits on Aug 12, 2026
- feat(metrics): add reason-keyed template filter accounting
  nh13
  committed
  924270b
- test(group): pin the fgbio five-column grouping metrics header
  nh13
  committed
  33ed418
- refactor: record filter rejections by reason in group and dedup
  nh13
  committed
  ee66dd5
- refactor(dedup): rename DedupMetrics to DedupCounts
  nh13
  committed
  72ef6b4
- feat(metrics): add DeduplicationMetrics with per-reason filter columns
  nh13
  committed
  f5b3c8e
- fix(dedup)!: report filtered template counts in the metrics file
  nh13
  committed
  c09a4ff
- refactor: share one template filter between group and dedup
  nh13
  committed
  be6041c
- docs(dedup): document the filter metrics columns
  nh13
  committed
  f36659d