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refactor(compare,fastq) + test: in-process Command::execute for Phase 3 (#352) - #355

Merged
nh13 merged 17 commits into
mainfrom
nh/issue-352-phase-3
May 22, 2026
Merged

nh13 merged 17 commits into
mainfrom
nh/issue-352-phase-3

test(zipper): invoke zipper Command::execute in-process for non-stdin…

b964c20
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90.91% (-0.03%) compared to c3b6dc6

View this Pull Request on Codecov

90.91% (-0.03%) compared to c3b6dc6

Details

Codecov Report

❌ Patch coverage is 69.23077% with 12 lines in your changes missing coverage. Please review.
✅ Project coverage is 90.91%. Comparing base (c3b6dc6) to head (b964c20).
⚠️ Report is 5 commits behind head on main.

Files with missing lines Patch % Lines
src/lib/commands/compare/metrics.rs 0.00% 11 Missing ⚠️
src/lib/commands/fastq.rs 93.33% 1 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##             main     #355      +/-   ##
==========================================
- Coverage   90.93%   90.91%   -0.03%     
==========================================
  Files          78       78              
  Lines       51046    51074      +28     
==========================================
+ Hits        46421    46432      +11     
- Misses       4625     4642      +17     

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