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fix: dedup --no-umi OOM on production WES data - #231

Merged
nh13 merged 3 commits into
mainfrom
nh/dedup-fix-oom
Apr 4, 2026
Merged

nh13 merged 3 commits into
mainfrom
nh/dedup-fix-oom

test(dedup): add regression test for large position group in no-umi mode

268d3fc
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Codecov / codecov/project succeeded Apr 4, 2026 in 0s

88.31% (+0.03%) compared to 0c6b0ae

View this Pull Request on Codecov

88.31% (+0.03%) compared to 0c6b0ae

Details

Codecov Report

❌ Patch coverage is 99.20000% with 1 line in your changes missing coverage. Please review.
✅ Project coverage is 88.31%. Comparing base (0c6b0ae) to head (268d3fc).
⚠️ Report is 1 commits behind head on main.

Files with missing lines Patch % Lines
src/lib/unified_pipeline/base.rs 0.00% 1 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##             main     #231      +/-   ##
==========================================
+ Coverage   88.27%   88.31%   +0.03%     
==========================================
  Files         113      113              
  Lines       53215    53322     +107     
==========================================
+ Hits        46977    47090     +113     
+ Misses       6238     6232       -6     

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