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build: Ignore staged changes on up-to-date check
Have `make check-uptodate` ignore staged changes so you can run `make ci` with all your changes staged to verify all is good before committing. The `check-uptodate` target leaves files dirty in the workspace so this change should not alter the original desired behaviour. `git status --porcelain` outputs a non-space character as the first character on a line for staged changes, unless it is `?` which means untracked.
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