Merge mods to sync com and emc code#1
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fossell
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Oct 28, 2019
fossell
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- comupp/src/unipost and sorc/ncep_post.fd will match.
- current as of sync testing date (not fully up to date with develop yet)
- Add comupp/parm control files to parm/.
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Dec 10, 2019
* Add capacity for reading fv3gfs netcdf files. * Initializing 3D radar reflectivity in read interface for gfs in netcdf. * Inlinepost (#1) * modified: jobs/JGLOBAL_NCEPPOST, scripts/exgdas_nceppost.sh.ecf, scripts/exgfs_nceppost.sh.ecf, ush/gfs_nceppost.sh Add an option INLINE_POST. If it is true, the grib2 "master" file is produced by the inline post in the forecast model. gfs_nceppost.sh script is then skipped. Also set FILTER=0 to turn off 5wav-filtered data. The UPP still needs to be modified to read in netcdf history files to produce sflux, goes image and gtg products. * add sflux to inlin post * Add for new parm files for running inline post new file: parm/post_tag_gfs128 new file: parm/post_tag_gfs65 new file: parm/postcntrl_gfs_two.xml new file: parm/postxconfig-NT-GFS-TWO.txt * Bug fix of in-line post in ex-scripts. * Add control file at F00 for in-line post. * Teak INITPOST_GFS_NETCDF.f. * Add capacity of processing global FV3 outputs in netcdf in workflow scripts. * Tweak reading netcdf 2D field from FV3 output. * change physcon module to physcon_post in INITPOST_GFS_NETCDF.f. * Sync the change of dbnet alert type for gtg product from NCO.
fossell
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Mar 9, 2020
* CMakeLists.txt: add MODULE to find_package calls * Cleanup of NetCDF in CMakeLists.txt
fossell
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Jun 29, 2020
* Initial spack/cmake version * updated for umbrella build * tweak to findnetcdf * added include directory * updated cmake * changed to https for cmake submodule * updated cmake submodule * updated install directory * added build for libnceppost.a * modifications for macOS clang/gfortran build * updated for gnu build * udpated cmake submodule * Add RST file for UPP v4.0 * Modifying introduction * merged develop in and separated library from executable in build * Update CMakeLists.txt files to support GNU compilers * applied patch from Dusan * Add conf.py for upp documentation * Add index.rst for upp documentation * Add readthedocs config file * Modify name of main rst doc in index for readthedocs build test * Change master file to index * Edits for UFS documentation to remove WRF and grib1 references * Add a readthedocs config file * Mods to config and index files for use in readthedocs * Update submodule pointer for cmake * Remove old GNU makefiles with problematic names (only differing in case from existing files) * Add files for GRIB2 table of fields * Update .gitmodules, add branch = ufs_release_1.0 for cmake * Update .gitmodules for testing, code review and merging * Update include/lib flags for sigio, sfcio, nemsio * Add REQUIRED attribute to find_package calls in CMakeLists.txt * Comment out LAPACK dependency in CMakeLists.txt * Revert change to .gitmodules, update submodule pointer for cmake * sorc/ncep_post.fd/CMakeLists.txt: change GFSIO_INC to GFSIO_INC4 * Add capacity of detecting scaning mode north2south vs south2north in gaussian grid from Dusan. * Re-factor CMake * Fix library linking * small fix to kyles refactor * Add capacity of detecting scaning mode north2south vs south2north in gaussian grid from Dusan. * Fix typo in sorc/ncep_post.fd/CMakeLists.txt * Fix how Intel compile options with spaces in them are handled * Update branch name for cmake submodule, update submodule pointer * Update submodule pointer for cmake * Update .gitmodules and submodule pointer for cmake, bugfixes for CMakeLists.txt * Update submodule pointer for cmake * fixes problem linking ncep_post with gnu/openmpi * Update submodule pointer for cmake * Revert .gitmodules change * Bugfix: comment out debug print statement that can lead to out-of-bounds access; update submodule pointer for cmake * Update submodule pointer for cmake * OpenMP bugfix, use lowercase in find_package(CRTM) * Fix post crash on macOS: use allocatable array * Update submodule pointer for cmake * Add UFS UPP rst documentation * Update submodule pointer for cmake * Rename g2tmpl_d to g2tmpl (NOAA-EMC#89) * Update submodule pointer for cmake * cleanup post Change-Id: Ie52af5ff79ac4122e79d7a46e89ee2077188b0a4 * we dont depend on C HDF5 library. remove. Change-Id: I26aa7c0bf7ed2783de1a9967d961d0260dee8b54 * use transitive properties. apply OpenMP flags if OpenMP is found. Formatting using cmake-format Change-Id: Ic08ce6bc85a7d949c779ec597241c8cb4c20db86 * add debug gnu flags. compile_definitions does not like the quotes around long long, remove Change-Id: Iccd5bb496944f75a79500729051dd571303cb50f * Update CMakeLists.txt * Update submodule pointer for cmake * Update submodule pointer for cmake * Add LGPL license to repository * EMC_post is a Fortran only project. blockIO.c is not used, so do not include in building * Update submodule pointer for cmake * Bug fix for unary operator in INITPOST_GFS_NEMS_MPIIO.f. (NOAA-EMC#92) * Remove old unused makefiles * CMakeLists.txt: install postxconfig-NT-GFS-F00.txt and postxconfig-NT-GFS.txt in share directory * Update version @fossell says post is at version 8.0.0 * Update submodule pointer for cmake * Fix Out of Bound Exception in GFSPOST.F (NOAA-EMC#100) * Fix out-of-bound error in tpause routine in GFSPOST.F * Fix use of undefined variables. * Feature/cleanup (NOAA-EMC#95) * cleanup post Change-Id: Ie52af5ff79ac4122e79d7a46e89ee2077188b0a4 * we dont depend on C HDF5 library. remove. Change-Id: I26aa7c0bf7ed2783de1a9967d961d0260dee8b54 * use transitive properties. apply OpenMP flags if OpenMP is found. Formatting using cmake-format Change-Id: Ic08ce6bc85a7d949c779ec597241c8cb4c20db86 * add debug gnu flags. compile_definitions does not like the quotes around long long, remove Change-Id: Iccd5bb496944f75a79500729051dd571303cb50f * Update CMakeLists.txt * EMC_post is a Fortran only project. blockIO.c is not used, so do not include in building * Update version @fossell says post is at version 8.0.0 * Revert "Feature/cleanup (NOAA-EMC#95)" This reverts commit 7e9797b. * remove unused compile definitions and update cmake pointer Change-Id: Ie47cf16ebc25928bf30bfd05d4f25678219571a6 * Fix ID index in WRF-CHEM SMOKE block, which currently causes failed build in debug mode * remove unnecessary commented line * NetCDF static fix (#1) * CMakeLists.txt: add MODULE to find_package calls * Cleanup of NetCDF in CMakeLists.txt * update cmake submodule pointer Change-Id: I763882fd6ecc4b8cc64a60eddabccfdb7046040d * Add MODULE to find_package(NetCDF) call (#3) * update cmake submodule pointer Change-Id: I69015efa425658645567e9d9f22d5e51301c1a0b * Change version from 8.0.0 to 1.0.0 * fix the install path of compiled Fortran module files Co-authored-by: Mark A Potts <mark.potts@noaa.gov> Co-authored-by: Dom Heinzeller <climbfuji@ymail.com> Co-authored-by: Mark Potts <33099090+mark-a-potts@users.noreply.github.com> Co-authored-by: Tracy <hertneky@ucar.edu> Co-authored-by: Kate Fossell <fossell@ucar.edu> Co-authored-by: Dusan Jovic <dusan.jovic@noaa.gov> Co-authored-by: Wen Meng <wen.meng@noaa.gov> Co-authored-by: Dom Heinzeller <dom.heinzeller@icloud.com> Co-authored-by: Kyle Gerheiser <kgerheiser@icloud.com> Co-authored-by: Mark Potts <mpotts@redlineperf.com> Co-authored-by: Kyle Gerheiser <3209794+kgerheiser@users.noreply.github.com> Co-authored-by: Dom Heinzeller <dom.heinzeller@noaa.gov> Co-authored-by: Tracy <tracy.hertneky@noaa.gov> Co-authored-by: Rahul Mahajan <aerorahul@users.noreply.github.com> Co-authored-by: WenMeng-NOAA <48260754+WenMeng-NOAA@users.noreply.github.com> Co-authored-by: Dusan Jovic <48258889+DusanJovic-NOAA@users.noreply.github.com>
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