Bump dep packages version and fix lint issues

[hwwhww]

1. Bump dependencies
   • Update most dependencies to the latest version
   • Remove dataclasses dep because it's built-in in Python 3.7+
   • Somehow, marko==1.2.2 is not backward compatible so I didn't update it
2. Fix the lint issues found by the newer linter
   • E741 ambiguous variable name 'l' in bit_reversal_permutation:
     • I renamed l to sequence. /cc @asn-d6
   • F541 f-string is missing placeholders:
     • I cleaned up the strings
   • from_bytes has incompatible type "str"; expected "Literal['little', 'big']":
     • This is annoying. The solution is adding Final type hint. I made some changes in setup.py

[asn-d6]

I renamed l to sequence. /cc @asn-d6 change LGTM! (Haven't looked at the non-4844 changes though)

[ralexstokes]

the changes all look good and if the CI passes them I'll assume all of the newer deps don't break anything

+1 on merge