Merge branch 'dev' into fix-codebase-docstrings

Signed-off-by: Alex Kanitz <[email protected]>

pro_tes/ga4gh/tes/task_runs.py

@@ -453,7 +453,7 @@ def _set_projection(self, view: str) -> Dict:
     def _update_task(
         self, payload: dict, db_document: DbDocument, start_time: str, **kwargs
     ) -> DbDocument:
-        """Update the incoming task document.
+        """Update the task document.
 
         Args:
             payload: A dictionary containing the payload for the update.
@@ -476,7 +476,7 @@ def _update_task(
         return db_document
 
     def _set_logs(self, payloads: dict, start_time: str) -> Dict:
-        """Create or update TesTask.logs and set start time.
+        """Create or update `TesTask.logs` and set start time.
 
         Args:
             payload: A dictionary containing the payload for the update.
@@ -508,7 +508,7 @@ def _update_doc_in_db(
         tes_uri: str,
         remote_task_id: str,
     ) -> DbDocument:
-        """Set end time, task metadata in TesTask.logs, and update document.
+        """Set end time, task metadata in `TesTask.logs`, and update document.
 
         Args:
             db_connector: The database connector.
@@ -567,7 +567,7 @@ def _update_task_metadata(
         Returns:
             The updated database document.
         """
-        for logs in db_document.task_incoming.logs:
+        for logs in db_document.task.logs:
             tesNextTes_obj = TesNextTes(id=remote_task_id, url=tes_uri)
             if logs.metadata.forwarded_to is None:
                 logs.metadata.forwarded_to = tesNextTes_obj