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28 changes: 28 additions & 0 deletions easybuild/easyconfigs/b/Blosc/Blosc-1.21.6-GCCcore-13.3.0.eb
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easyblock = 'CMakeMake'

name = 'Blosc'
version = '1.21.6'

homepage = 'https://www.blosc.org/'

description = "Blosc, an extremely fast, multi-threaded, meta-compressor library"

toolchain = {'name': 'GCCcore', 'version': '13.3.0'}
toolchainopts = {'pic': True}

source_urls = ['https://github.com/Blosc/c-blosc/archive/']
sources = ['v%(version)s.tar.gz']
checksums = ['9fcd60301aae28f97f1301b735f966cc19e7c49b6b4321b839b4579a0c156f38']

builddependencies = [
('binutils', '2.42'),
('CMake', '3.29.3'),
]

sanity_check_paths = {
'files': ['include/blosc-export.h', 'include/blosc.h', 'lib/libblosc.a',
'lib/libblosc.%s' % SHLIB_EXT],
'dirs': [],
}

moduleclass = 'lib'
31 changes: 31 additions & 0 deletions easybuild/easyconfigs/b/Blosc2/Blosc2-2.17.0-GCCcore-13.3.0.eb
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# This file is an EasyBuild reciPY as per https://github.com/easybuilders/easybuild
# Author: Denis Kristak
# Update: Thomas Hoffmann (EMBL)
easyblock = 'CMakeMake'

name = 'Blosc2'
version = '2.17.0'

homepage = 'https://www.blosc.org/'

description = "Blosc, an extremely fast, multi-threaded, meta-compressor library"

toolchain = {'name': 'GCCcore', 'version': '13.3.0'}
toolchainopts = {'pic': True}

source_urls = ['https://github.com/Blosc/c-blosc2/archive/']
sources = ['v%(version)s.tar.gz']
checksums = ['f8d5b7167f6032bc286b4de63a7feae281d1845d962edcfa21d81a025eef2bb2']

builddependencies = [
('binutils', '2.42'),
('CMake', '3.29.3'),
]

sanity_check_paths = {
'files': ['include/blosc2/blosc2-export.h', 'include/blosc2.h', 'lib/libblosc2.a',
'lib/libblosc2.%s' % SHLIB_EXT],
'dirs': [],
}

moduleclass = 'lib'
70 changes: 70 additions & 0 deletions easybuild/easyconfigs/p/PyTables/PyTables-3.10.2-foss-2024a.eb
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# http://www.pytables.org/usersguide/installation.html
# updated: Denis Kristak (INUITS)

easyblock = 'PythonBundle'

name = 'PyTables'
version = '3.10.2'

homepage = 'https://www.pytables.org'
description = """PyTables is a package for managing hierarchical datasets and designed to efficiently and easily cope
with extremely large amounts of data. PyTables is built on top of the HDF5 library, using the Python language and the
NumPy package. It features an object-oriented interface that, combined with C extensions for the performance-critical
parts of the code (generated using Cython), makes it a fast, yet extremely easy to use tool for interactively browsing,
processing and searching very large amounts of data. One important feature of PyTables is that it optimizes memory and
disk resources so that data takes much less space (specially if on-flight compression is used) than other solutions
such as relational or object oriented databases."""

toolchain = {'name': 'foss', 'version': '2024a'}
toolchainopts = {'usempi': True}

builddependencies = [
('pkgconf', '2.2.0'),
('CMake', '3.29.3'),
('Cython', '3.0.10'),
('scikit-build-core', '0.10.6'),
]

dependencies = [
('Python', '3.12.3'),
('SciPy-bundle', '2024.05'), # provides numexpr
('HDF5', '1.14.5'),
('LZO', '2.10'),
('Blosc', '1.21.6'),
('Blosc2', '2.17.0'),
('py-cpuinfo', '9.0.0'),
]

exts_list = [
('ndindex', '1.9.2', {
'checksums': ['b8658a06e52d6c47445c2ec11d292e1d52c3af259214c8b52e3a1aab733daa72'],
}),
('blosc2', '3.2.0', {
'preinstallopts': """USE_SYSTEM_BLOSC2=ON """,
'checksums': ['db38f2265cd7938cbdc7b029420d2d5b65fcb8f91ce00bb6d6bdac63194d62cc'],
}),
('tables', version, {
'patches': [
'PyTables-3.8.0_fix-libs.patch',
'PyTables-3.9.2_fix-find-blosc2-dep.patch',
],
'checksums': [
{'tables-3.10.2.tar.gz': '2544812a7186fadba831d6dd34eb49ccd788d6a83f4e4c2b431b835b6796c910'},
{'PyTables-3.8.0_fix-libs.patch': '7a1e6fa1f9169e52293e2b433a4302fa13c5d31e7709cd4fe0e087199b9e3f8a'},
{'PyTables-3.9.2_fix-find-blosc2-dep.patch':
'e2149f43da12d9ba26cca4c838f6e8a4694adab75c0f055b186674a017e41a55'},
],
}),
]

local_bins = ['pt2to3', 'ptdump', 'ptrepack', 'pttree']
sanity_check_paths = {
'files': ['bin/%s' % x for x in local_bins],
'dirs': ['lib/python%(pyshortver)s/site-packages'],
}

options = {'modulename': 'tables'}

sanity_check_commands = ["%s --help" % x for x in local_bins]

moduleclass = 'data'