{vis}[foss/2024a] VTK v9.3.1, PyVista v0.44.2 by appolloford · Pull Request #22481 · easybuilders/easybuild-easyconfigs

appolloford · 2025-03-06T13:51:03Z

(created using eb --new-pr)

…a.eb

github-actions · 2025-03-06T13:51:33Z

Updated software `PyVista-0.44.2-foss-2024a.eb`

Diff against PyVista-0.43.8-foss-2022a.eb

easybuild/easyconfigs/p/PyVista/PyVista-0.43.8-foss-2022a.eb

diff --git a/easybuild/easyconfigs/p/PyVista/PyVista-0.43.8-foss-2022a.eb b/easybuild/easyconfigs/p/PyVista/PyVista-0.44.2-foss-2024a.eb
index 7dcea9255c..558796e254 100644
--- a/easybuild/easyconfigs/p/PyVista/PyVista-0.43.8-foss-2022a.eb
+++ b/easybuild/easyconfigs/p/PyVista/PyVista-0.44.2-foss-2024a.eb
@@ -1,21 +1,22 @@
 easyblock = 'PythonBundle'
 
 name = 'PyVista'
-version = '0.43.8'
+version = '0.44.2'
 
 homepage = 'https://docs.pyvista.org/'
 description = """
 3D plotting and mesh analysis through a streamlined interface for the
 Visualization Toolkit (VTK)"""
 
-toolchain = {'name': 'foss', 'version': '2022a'}
+toolchain = {'name': 'foss', 'version': '2024a'}
 
 dependencies = [
-    ('Python', '3.10.4'),
-    ('VTK', '9.2.2'),
-    ('imageio', '2.22.2'),
-    ('matplotlib', '3.5.2'),
-    ('Pillow', '9.1.1'),
+    ('Python', '3.12.3'),
+    ('Python-bundle-PyPI', '2024.06'),
+    ('VTK', '9.3.1'),  # require vtk<9.4.0
+    ('imageio', '2.36.1'),
+    ('matplotlib', '3.9.2'),
+    ('Pillow', '10.4.0'),
 ]
 
 exts_list = [
@@ -28,21 +29,12 @@ exts_list = [
     ('colorcet', '3.1.0', {
         'checksums': ['2921b3cd81a2288aaf2d63dbc0ce3c26dcd882e8c389cc505d6886bf7aa9a4eb'],
     }),
-    ('commonmark', '0.9.1', {
-        'checksums': ['452f9dc859be7f06631ddcb328b6919c67984aca654e5fefb3914d54691aed60'],
-    }),
-    ('rich', '12.6.0', {
-        'checksums': ['ba3a3775974105c221d31141f2c116f4fd65c5ceb0698657a11e9f295ec93fd0'],
-    }),
     ('meshio', '5.3.5', {
         'checksums': ['f21f01abd9f29ba06ea119304b3d39e610421cfe93b9dd23362834919f87586d'],
     }),
-    ('pooch', '1.6.0', {
-        'checksums': ['57d20ec4b10dd694d2b05bb64bc6b109c6e85a6c1405794ce87ed8b341ab3f44'],
-    }),
     ('pyvista', version, {
         'use_pip_extras': 'colormaps,io',
-        'checksums': ['b9220753ae94fb8ca3047d291a706a4046b06659016c0000c184b5f24504f8d0'],
+        'checksums': ['db65943c3c1c9ba49fe16f5a25a5bc23b74bf1ea7a38aae4ef9c4dc5838ccf5e'],
     }),
 ]

Diff against PyVista-0.43.8-foss-2023a.eb

easybuild/easyconfigs/p/PyVista/PyVista-0.43.8-foss-2023a.eb

diff --git a/easybuild/easyconfigs/p/PyVista/PyVista-0.43.8-foss-2023a.eb b/easybuild/easyconfigs/p/PyVista/PyVista-0.44.2-foss-2024a.eb
index f09df7dfd3..558796e254 100644
--- a/easybuild/easyconfigs/p/PyVista/PyVista-0.43.8-foss-2023a.eb
+++ b/easybuild/easyconfigs/p/PyVista/PyVista-0.44.2-foss-2024a.eb
@@ -1,22 +1,22 @@
 easyblock = 'PythonBundle'
 
 name = 'PyVista'
-version = '0.43.8'
+version = '0.44.2'
 
 homepage = 'https://docs.pyvista.org/'
 description = """
 3D plotting and mesh analysis through a streamlined interface for the
 Visualization Toolkit (VTK)"""
 
-toolchain = {'name': 'foss', 'version': '2023a'}
+toolchain = {'name': 'foss', 'version': '2024a'}
 
 dependencies = [
-    ('Python', '3.11.3'),
-    ('Python-bundle-PyPI', '2023.06'),
-    ('VTK', '9.3.0'),
-    ('imageio', '2.33.1'),
-    ('matplotlib', '3.7.2'),
-    ('Pillow', '10.0.0'),
+    ('Python', '3.12.3'),
+    ('Python-bundle-PyPI', '2024.06'),
+    ('VTK', '9.3.1'),  # require vtk<9.4.0
+    ('imageio', '2.36.1'),
+    ('matplotlib', '3.9.2'),
+    ('Pillow', '10.4.0'),
 ]
 
 exts_list = [
@@ -34,7 +34,7 @@ exts_list = [
     }),
     ('pyvista', version, {
         'use_pip_extras': 'colormaps,io',
-        'checksums': ['b9220753ae94fb8ca3047d291a706a4046b06659016c0000c184b5f24504f8d0'],
+        'checksums': ['db65943c3c1c9ba49fe16f5a25a5bc23b74bf1ea7a38aae4ef9c4dc5838ccf5e'],
     }),
 ]

Updated software `VTK-9.3.1-foss-2024a.eb`

Diff against VTK-9.2.6-foss-2023a.eb

easybuild/easyconfigs/v/VTK/VTK-9.2.6-foss-2023a.eb

diff --git a/easybuild/easyconfigs/v/VTK/VTK-9.2.6-foss-2023a.eb b/easybuild/easyconfigs/v/VTK/VTK-9.3.1-foss-2024a.eb
index b01bd65e22..5866f71672 100644
--- a/easybuild/easyconfigs/v/VTK/VTK-9.2.6-foss-2023a.eb
+++ b/easybuild/easyconfigs/v/VTK/VTK-9.3.1-foss-2024a.eb
@@ -2,13 +2,12 @@
 # Authors::
 # * Fotis Georgatos <fotis@cern.ch>
 # * Robert Mijakovic <robert.mijakovic@lxp.lu>
-# Update: Pavel Tománek (Inuits)
 ##
 
 easyblock = 'CMakeNinja'
 
 name = 'VTK'
-version = '9.2.6'
+version = '9.3.1'
 
 homepage = 'https://www.vtk.org'
 description = """The Visualization Toolkit (VTK) is an open-source, freely available software system for
@@ -17,7 +16,7 @@ description = """The Visualization Toolkit (VTK) is an open-source, freely avail
  algorithms including: scalar, vector, tensor, texture, and volumetric methods; and advanced modeling techniques
  such as: implicit modeling, polygon reduction, mesh smoothing, cutting, contouring, and Delaunay triangulation."""
 
-toolchain = {'name': 'foss', 'version': '2023a'}
+toolchain = {'name': 'foss', 'version': '2024a'}
 toolchainopts = {'usempi': True}
 
 source_urls = ['https://www.vtk.org/files/release/%(version_major_minor)s']
@@ -27,23 +26,23 @@ sources = [
 ]
 patches = [('vtk-version.egg-info', '.')]
 checksums = [
-    {'VTK-9.2.6.tar.gz': '06fc8d49c4e56f498c40fcb38a563ed8d4ec31358d0101e8988f0bb4d539dd12'},
-    {'VTKData-9.2.6.tar.gz': '032c4b827173f859c898403d25360dc99409a4674559ad58f48828f23a6258b8'},
+    {'VTK-9.3.1.tar.gz': '8354ec084ea0d2dc3d23dbe4243823c4bfc270382d0ce8d658939fd50061cab8'},
+    {'VTKData-9.3.1.tar.gz': '299569eba74413ee90cc5073511e82a957d7d685deb0a9f16362e2714e4e7f6f'},
     {'vtk-version.egg-info': '787b82415ae7a4a1f815b4db0e25f7abc809a05fc85d7d219627f3a7e5d3867b'},
 ]
 
 builddependencies = [
-    ('CMake', '3.26.3'),
-    ('Ninja', '1.11.1'),
+    ('CMake', '3.29.3'),
+    ('Ninja', '1.12.1'),
 ]
 
 dependencies = [
-    ('Python', '3.11.3'),
-    ('SciPy-bundle', '2023.07'),
-    ('XZ', '5.4.2'),
+    ('Python', '3.12.3'),
+    ('SciPy-bundle', '2024.05'),
+    ('XZ', '5.4.5'),
     ('libGLU', '9.0.3'),
-    ('X11', '20230603'),
-    ('Qt5', '5.15.10'),
+    ('X11', '20240607'),
+    ('Qt6', '6.7.2'),
 ]
 
 separate_build_dir = True
@@ -59,8 +58,8 @@ configopts += "-DPython3_INCLUDE_DIR=$EBROOTPYTHON/include/python%(pyshortver)s
 configopts += "-DPython3_LIBRARY=$EBROOTPYTHON/lib/libpython%(pyshortver)s.so "
 # Other
 configopts += "-DVTK_USE_MPI=ON "
-configopts += "-DVTK_QT_VERSION=5 "
-configopts += "-DQt5_DIR=$EBROOTQT5 "
+configopts += "-DVTK_QT_VERSION=6 "
+configopts += "-DQt6_DIR=$EBROOTQT6 "
 configopts += "-DVTK_MODULE_ENABLE_VTK_GuiSupportQt=YES "
 configopts += "-DVTK_MODULE_ENABLE_VTK_ViewsQt=YES"

Diff against VTK-9.3.0-foss-2023b.eb

easybuild/easyconfigs/v/VTK/VTK-9.3.0-foss-2023b.eb

diff --git a/easybuild/easyconfigs/v/VTK/VTK-9.3.0-foss-2023b.eb b/easybuild/easyconfigs/v/VTK/VTK-9.3.1-foss-2024a.eb
index 0941bc83c2..5866f71672 100644
--- a/easybuild/easyconfigs/v/VTK/VTK-9.3.0-foss-2023b.eb
+++ b/easybuild/easyconfigs/v/VTK/VTK-9.3.1-foss-2024a.eb
@@ -7,7 +7,7 @@
 easyblock = 'CMakeNinja'
 
 name = 'VTK'
-version = '9.3.0'
+version = '9.3.1'
 
 homepage = 'https://www.vtk.org'
 description = """The Visualization Toolkit (VTK) is an open-source, freely available software system for
@@ -16,7 +16,7 @@ description = """The Visualization Toolkit (VTK) is an open-source, freely avail
  algorithms including: scalar, vector, tensor, texture, and volumetric methods; and advanced modeling techniques
  such as: implicit modeling, polygon reduction, mesh smoothing, cutting, contouring, and Delaunay triangulation."""
 
-toolchain = {'name': 'foss', 'version': '2023b'}
+toolchain = {'name': 'foss', 'version': '2024a'}
 toolchainopts = {'usempi': True}
 
 source_urls = ['https://www.vtk.org/files/release/%(version_major_minor)s']
@@ -26,23 +26,23 @@ sources = [
 ]
 patches = [('vtk-version.egg-info', '.')]
 checksums = [
-    {'VTK-9.3.0.tar.gz': 'fdc7b9295225b34e4fdddc49cd06e66e94260cb00efee456e0f66568c9681be9'},
-    {'VTKData-9.3.0.tar.gz': 'f82142dd327e995c9536c1003e1370bb4092c96f23edb8119d16d2411ef35dc3'},
+    {'VTK-9.3.1.tar.gz': '8354ec084ea0d2dc3d23dbe4243823c4bfc270382d0ce8d658939fd50061cab8'},
+    {'VTKData-9.3.1.tar.gz': '299569eba74413ee90cc5073511e82a957d7d685deb0a9f16362e2714e4e7f6f'},
     {'vtk-version.egg-info': '787b82415ae7a4a1f815b4db0e25f7abc809a05fc85d7d219627f3a7e5d3867b'},
 ]
 
 builddependencies = [
-    ('CMake', '3.27.6'),
-    ('Ninja', '1.11.1'),
+    ('CMake', '3.29.3'),
+    ('Ninja', '1.12.1'),
 ]
 
 dependencies = [
-    ('Python', '3.11.5'),
-    ('SciPy-bundle', '2023.11'),
-    ('XZ', '5.4.4'),
+    ('Python', '3.12.3'),
+    ('SciPy-bundle', '2024.05'),
+    ('XZ', '5.4.5'),
     ('libGLU', '9.0.3'),
-    ('X11', '20231019'),
-    ('Qt5', '5.15.13'),
+    ('X11', '20240607'),
+    ('Qt6', '6.7.2'),
 ]
 
 separate_build_dir = True
@@ -58,8 +58,8 @@ configopts += "-DPython3_INCLUDE_DIR=$EBROOTPYTHON/include/python%(pyshortver)s
 configopts += "-DPython3_LIBRARY=$EBROOTPYTHON/lib/libpython%(pyshortver)s.so "
 # Other
 configopts += "-DVTK_USE_MPI=ON "
-configopts += "-DVTK_QT_VERSION=5 "
-configopts += "-DQt5_DIR=$EBROOTQT5 "
+configopts += "-DVTK_QT_VERSION=6 "
+configopts += "-DQt6_DIR=$EBROOTQT6 "
 configopts += "-DVTK_MODULE_ENABLE_VTK_GuiSupportQt=YES "
 configopts += "-DVTK_MODULE_ENABLE_VTK_ViewsQt=YES"

Diff against VTK-9.3.0-foss-2023a.eb

easybuild/easyconfigs/v/VTK/VTK-9.3.0-foss-2023a.eb

diff --git a/easybuild/easyconfigs/v/VTK/VTK-9.3.0-foss-2023a.eb b/easybuild/easyconfigs/v/VTK/VTK-9.3.1-foss-2024a.eb
index d8bf7f72df..5866f71672 100644
--- a/easybuild/easyconfigs/v/VTK/VTK-9.3.0-foss-2023a.eb
+++ b/easybuild/easyconfigs/v/VTK/VTK-9.3.1-foss-2024a.eb
@@ -2,13 +2,12 @@
 # Authors::
 # * Fotis Georgatos <fotis@cern.ch>
 # * Robert Mijakovic <robert.mijakovic@lxp.lu>
-# Update: Pavel Tománek (Inuits)
 ##
 
 easyblock = 'CMakeNinja'
 
 name = 'VTK'
-version = '9.3.0'
+version = '9.3.1'
 
 homepage = 'https://www.vtk.org'
 description = """The Visualization Toolkit (VTK) is an open-source, freely available software system for
@@ -17,7 +16,7 @@ description = """The Visualization Toolkit (VTK) is an open-source, freely avail
  algorithms including: scalar, vector, tensor, texture, and volumetric methods; and advanced modeling techniques
  such as: implicit modeling, polygon reduction, mesh smoothing, cutting, contouring, and Delaunay triangulation."""
 
-toolchain = {'name': 'foss', 'version': '2023a'}
+toolchain = {'name': 'foss', 'version': '2024a'}
 toolchainopts = {'usempi': True}
 
 source_urls = ['https://www.vtk.org/files/release/%(version_major_minor)s']
@@ -27,23 +26,23 @@ sources = [
 ]
 patches = [('vtk-version.egg-info', '.')]
 checksums = [
-    {'VTK-9.3.0.tar.gz': 'fdc7b9295225b34e4fdddc49cd06e66e94260cb00efee456e0f66568c9681be9'},
-    {'VTKData-9.3.0.tar.gz': 'f82142dd327e995c9536c1003e1370bb4092c96f23edb8119d16d2411ef35dc3'},
+    {'VTK-9.3.1.tar.gz': '8354ec084ea0d2dc3d23dbe4243823c4bfc270382d0ce8d658939fd50061cab8'},
+    {'VTKData-9.3.1.tar.gz': '299569eba74413ee90cc5073511e82a957d7d685deb0a9f16362e2714e4e7f6f'},
     {'vtk-version.egg-info': '787b82415ae7a4a1f815b4db0e25f7abc809a05fc85d7d219627f3a7e5d3867b'},
 ]
 
 builddependencies = [
-    ('CMake', '3.26.3'),
-    ('Ninja', '1.11.1'),
+    ('CMake', '3.29.3'),
+    ('Ninja', '1.12.1'),
 ]
 
 dependencies = [
-    ('Python', '3.11.3'),
-    ('SciPy-bundle', '2023.07'),
-    ('XZ', '5.4.2'),
+    ('Python', '3.12.3'),
+    ('SciPy-bundle', '2024.05'),
+    ('XZ', '5.4.5'),
     ('libGLU', '9.0.3'),
-    ('X11', '20230603'),
-    ('Qt5', '5.15.10'),
+    ('X11', '20240607'),
+    ('Qt6', '6.7.2'),
 ]
 
 separate_build_dir = True
@@ -59,8 +58,8 @@ configopts += "-DPython3_INCLUDE_DIR=$EBROOTPYTHON/include/python%(pyshortver)s
 configopts += "-DPython3_LIBRARY=$EBROOTPYTHON/lib/libpython%(pyshortver)s.so "
 # Other
 configopts += "-DVTK_USE_MPI=ON "
-configopts += "-DVTK_QT_VERSION=5 "
-configopts += "-DQt5_DIR=$EBROOTQT5 "
+configopts += "-DVTK_QT_VERSION=6 "
+configopts += "-DQt6_DIR=$EBROOTQT6 "
 configopts += "-DVTK_MODULE_ENABLE_VTK_GuiSupportQt=YES "
 configopts += "-DVTK_MODULE_ENABLE_VTK_ViewsQt=YES"

smoors · 2025-03-10T14:38:59Z

@boegelbot please test @ jsc-zen3
EB_BRANCH=5.0.x

boegelbot · 2025-03-10T14:40:16Z

@smoors: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ "5.0.x" != 'develop' ]]; then EB_BRANCH="5.0.x" ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/"5.0.x" source init_env_easybuild_develop.sh; fi; EB_PR=22481 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH="5.0.x" /opt/software/slurm/bin/sbatch --job-name test_PR_22481 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

exit code: 0
output:

Submitted batch job 5909

Test results coming soon (I hope)...

Details

- notification for comment with ID 2710827054 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2025-03-10T15:32:55Z

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.5, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.21
See https://gist.github.com/boegelbot/5cd961e4bd4caf864c7caf3f4beb619d for a full test report.

…asyconfigs into 20250306135059_new_pr_VTK931

smoors · 2025-03-19T16:46:03Z

something went wrong here, will close and reopen to hopefully fix it

smoors · 2025-03-20T08:35:19Z

@boegelbot please test @ jsc-zen3

boegelbot · 2025-03-20T08:40:08Z

@smoors: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=22481 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_22481 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

exit code: 0
output:

Submitted batch job 6007

Test results coming soon (I hope)...

Details

- notification for comment with ID 2739585154 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2025-03-20T09:31:05Z

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.5, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.21
See https://gist.github.com/boegelbot/2c0362296e37d4a5bcf279007f29324e for a full test report.

smoors

lgtm

adding easyconfigs: VTK-9.3.1-foss-2024a.eb, PyVista-0.44.2-foss-2024…

4206ac4

…a.eb

github-actions Bot added the update label Mar 6, 2025

appolloford mentioned this pull request Mar 8, 2025

{phys}[foss/2024a] PyAEDT v0.15.0 #22506

Merged

4 tasks

easybuilders deleted a comment from boegelbot Mar 10, 2025

Merge branch 'develop' of https://github.com/easybuilders/easybuild-e…

8e2392b

…asyconfigs into 20250306135059_new_pr_VTK931

github-actions Bot added change new workflow labels Mar 19, 2025

smoors changed the base branch from 5.0.x to develop March 19, 2025 16:40

smoors closed this Mar 19, 2025

smoors reopened this Mar 19, 2025

github-actions Bot removed change new workflow labels Mar 19, 2025

smoors added this to the release after 5.0.0 milestone Mar 20, 2025

smoors approved these changes Mar 20, 2025

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smoors merged commit 5514259 into easybuilders:develop Mar 20, 2025
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{vis}[foss/2024a] VTK v9.3.1, PyVista v0.44.2#22481

{vis}[foss/2024a] VTK v9.3.1, PyVista v0.44.2#22481
smoors merged 2 commits intoeasybuilders:developfrom
appolloford:20250306135059_new_pr_VTK931

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Updated software PyVista-0.44.2-foss-2024a.eb

Updated software VTK-9.3.1-foss-2024a.eb

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github-actions Bot commented Mar 6, 2025 •

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Updated software `PyVista-0.44.2-foss-2024a.eb`

Updated software `VTK-9.3.1-foss-2024a.eb`