{lib}[foss/2024a] cnvpytor v1.3.1

easybuild/easyconfigs/c/cnvpytor/cnvpytor-1.3.1-foss-2024a.eb

@@ -0,0 +1,45 @@
+easyblock = 'PythonBundle'
+
+name = 'cnvpytor'
+version = '1.3.1'
+
+homepage = 'https://github.com/abyzovlab/CNVpytor'
+description = """A tool for copy number variation detection and analysis from read depth and allele imbalance in 
+whole-genome sequencing"""
+
+toolchain = {'name': 'foss', 'version': '2024a'}
+
+dependencies = [
+    ('Python', '3.12.3'),
+    ('libreadline', '8.2'),
+    ('h5py', '3.12.1'),
+    ('matplotlib', '3.9.2'),
+    ('XlsxWriter', '3.2.0'),
+    ('Pysam', '0.22.1')
+]
+
+exts_defaultclass = 'PythonPackage'
+exts_list = [
+    ('gnureadline', '8.2.13', {
+        'source_tmpl': 'gnureadline-8.2.13.tar.gz',
+        'source_urls': [
+            'https://files.pythonhosted.org/packages/cb/92/'
+            '20723aa239b9a8024e6f8358c789df8859ab1085a1ae106e5071727ad20f/'
+        ],
+        'checksums': ['c9b9e1e7ba99a80bb50c12027d6ce692574f77a65bf57bc97041cf81c0f49bd1'],
+    }),
+    (name, version, {
+        'source_urls': ['https://github.com/abyzovlab/CNVpytor/archive/refs/tags/'],
+        'sources':  ['v%(version)s.tar.gz'],
+        'checksums': ['08762a9a48e6051cfbec7be00806a3cfec769befb58dd791d6c8c1d4a3e18f4c'],
+    }),
+]
+
+use_pip = True
+sanity_pip_check = True
+
+sanity_check_commands = [
+    "cnvpytor --help",
+]
+
+moduleclass = 'lib'