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{bio}[foss/2023a] OpenForceField-Toolkit v0.16.0 #20852
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Merged
boegel
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easybuilders:develop
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pavelToman:20240619103356_new_pr_OpenForceField-Toolkit0160
Aug 9, 2024
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18289aa
adding easyconfigs: OpenForceField-Toolkit-0.16.0-foss-2023a.eb
pavelToman f3d65d2
Update OpenForceField-Toolkit-0.16.0-foss-2023a.eb
pavelToman b94bb4c
fix checksum of toolkit
pavelToman 48d40dc
Update OpenForceField-Toolkit-0.16.0-foss-2023a.eb fix whitespace
pavelToman 31713d5
update checksum openff-nagl + change to sources
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144 changes: 144 additions & 0 deletions
144
easybuild/easyconfigs/o/OpenForceField-Toolkit/OpenForceField-Toolkit-0.16.0-foss-2023a.eb
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,144 @@ | ||
| easyblock = 'PythonBundle' | ||
|
|
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| name = 'OpenForceField-Toolkit' | ||
| version = '0.16.0' | ||
|
|
||
| homepage = 'https://github.com/openforcefield/openff-toolkit' | ||
| description = """The Open Force Field Toolkit provides implementations of the SMIRNOFF format, | ||
| parameterization engine, and other tools.""" | ||
|
|
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| toolchain = {'name': 'foss', 'version': '2023a'} | ||
|
|
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| builddependencies = [('poetry', '1.5.1')] | ||
| dependencies = [ | ||
| ('Python', '3.11.3'), | ||
| ('Python-bundle-PyPI', '2023.06'), | ||
| ('SciPy-bundle', '2023.07'), | ||
| ('networkx', '3.1'), | ||
| ('typing-extensions', '4.9.0'), | ||
| ('pydantic', '2.5.3'), | ||
| ('tqdm', '4.66.1'), | ||
| ('OpenMM', '8.0.0'), | ||
| ('PyYAML', '6.0'), | ||
| ('RDKit', '2024.03.3'), | ||
| ('MDTraj', '1.9.9'), | ||
| ('JupyterNotebook', '7.0.2'), | ||
| ('AmberTools', '23.6'), | ||
| ('Pint', '0.23'), | ||
| ('nglview', '3.1.2'), | ||
| ] | ||
|
|
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| use_pip = True | ||
|
|
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| exts_list = [ | ||
| ('qcelemental', '0.26.0', { | ||
| 'checksums': ['a14e8510cdbfda645ef1461c1afd02efb599311733dbba5f83fcd1d6168a6ddd'], | ||
| }), | ||
| ('PyJWT', '2.8.0', { | ||
| 'modulename': 'jwt', | ||
| 'checksums': ['57e28d156e3d5c10088e0c68abb90bfac3df82b40a71bd0daa20c65ccd5c23de'], | ||
| }), | ||
| ('apsw', '3.46.0.0', { | ||
| 'checksums': ['e128ccaab511f9a7fc48be6414f99a9197f83a69624d8ba40c1ca241bdef418e'], | ||
| }), | ||
| ('zstandard', '0.18.0', { | ||
| 'checksums': ['0ac0357a0d985b4ff31a854744040d7b5754385d1f98f7145c30e02c6865cb6f'], | ||
| }), | ||
| ('qcportal', '0.55', { | ||
| 'source_tmpl': '%(name)s-%(version)s-py3-none-any.whl', | ||
| 'checksums': ['f6eb86d6ace4ae6a71bbd8e2ee054305aff2c1da0198a3741b0d589c572a31b3'], | ||
| }), | ||
| ('cached-property', '1.5.2', { | ||
| 'checksums': ['9fa5755838eecbb2d234c3aa390bd80fbd3ac6b6869109bfc1b499f7bd89a130'], | ||
| }), | ||
| ('cachetools', '5.3.3', { | ||
| 'checksums': ['ba29e2dfa0b8b556606f097407ed1aa62080ee108ab0dc5ec9d6a723a007d105'], | ||
| }), | ||
| ('python-constraint', '1.4.0', { | ||
| 'modulename': 'constraint', | ||
| 'source_tmpl': '%(name)s-%(version)s.tar.bz2', | ||
| 'checksums': ['501d6f17afe0032dfc6ea6c0f8acc12e44f992733f00e8538961031ef27ccb8e'], | ||
| }), | ||
| ('bson', '0.5.10', { | ||
| 'checksums': ['d6511b2ab051139a9123c184de1a04227262173ad593429d21e443d6462d6590'], | ||
| }), | ||
| ('xmltodict', '0.13.0', { | ||
| 'checksums': ['341595a488e3e01a85a9d8911d8912fd922ede5fecc4dce437eb4b6c8d037e56'], | ||
| }), | ||
| ('intermol', '0.1.2', { | ||
| 'source_urls': ['https://github.com/shirtsgroup/InterMol/archive/'], | ||
| 'sources': [{'download_filename': 'v%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}], | ||
| 'checksums': ['a3065133ba16585a5db3807466a36242d191156525c33079cf46a97cedcfe835'], | ||
| }), | ||
| ('SMIRNOFF99Frosst', '1.1.0', { | ||
| 'source_urls': ['https://github.com/openforcefield/smirnoff99Frosst/archive/'], | ||
| 'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}], | ||
| 'checksums': ['940c4ed3cd720e746549a3335f10b7b0d9047a67bc216ad45dd875be5c8ec467'], | ||
| }), | ||
| ('SMIRNOFF-Plugins', '2024.01.0', { | ||
| 'source_urls': ['https://github.com/openforcefield/smirnoff-plugins/archive/'], | ||
| 'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}], | ||
| 'checksums': ['8ba4dbc6ed320f06f30bf42e8f70399bc3818becd668990693b51ddca183ff74'], | ||
| }), | ||
| ('OpenForceField-ForceFields', '2024.04.0', { | ||
| 'modulename': 'openforcefields', | ||
| 'source_urls': ['https://github.com/openforcefield/openff-forcefields/archive/'], | ||
| 'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}], | ||
| 'checksums': ['fc7094cdb74bf9f0ed665dfc716cc62c5a37def3fc7e852adeae0ae4b60169c7'], | ||
| }), | ||
| ('OpenForceField-Amber-FF-Ports', '0.0.4', { | ||
| 'modulename': 'openff.amber_ff_ports', | ||
| 'source_urls': ['https://github.com/openforcefield/openff-amber-ff-ports/archive/'], | ||
| 'sources': [{'download_filename': 'v%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}], | ||
| 'checksums': ['dbf2d1ccce06b0627b1eccae7e227ad800ff1cbac3e869344de265b178cc0207'], | ||
| }), | ||
| ('OpenForceField-Utilities', '0.1.12', { | ||
| 'modulename': 'openff.utilities', | ||
| 'source_urls': ['https://github.com/openforcefield/openff-utilities/archive/'], | ||
| 'sources': [{'download_filename': 'v%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}], | ||
| 'checksums': ['92882c5b87b40bdb4ee1e8c84c0ecc0fc83f26eaf3e3befde41bfdcf93d75dea'], | ||
| }), | ||
| ('OpenForceField-Units', '0.2.2', { | ||
| 'modulename': 'openff.units', | ||
| 'source_urls': ['https://github.com/openforcefield/openff-units/archive/'], | ||
| 'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}], | ||
| 'checksums': ['532746534c1937938580d5cfe98f414aff9bfbcc66970e115a88a38f6d5a2581'], | ||
| }), | ||
| ('OpenForceField-NAGL-Models', '0.2.0', { | ||
| 'modulename': 'openff.nagl_models', | ||
| 'source_urls': ['https://github.com/openforcefield/openff-nagl-models/archive/'], | ||
| 'sources': [{'download_filename': 'v%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}], | ||
| 'checksums': ['5ccc55d7f0fcd24577796fd8b2bfd85b035ee8060e441c1f7dfc6f1949b9dee5'], | ||
| }), | ||
| ('OpenForceField-Models', '0.1.2', { | ||
| 'modulename': 'openff.models', | ||
| 'source_urls': ['https://github.com/openforcefield/openff-models/archive/'], | ||
| 'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}], | ||
| 'checksums': ['cf2aa7ef467721f141149e4ce96134db390b27012f09996c4442a3fad2371653'], | ||
| }), | ||
| ('OpenForceField-Interchange', '0.3.27', { | ||
| 'modulename': 'openff.interchange', | ||
| 'source_urls': ['https://github.com/openforcefield/openff-interchange/archive/'], | ||
| 'sources': [{'download_filename': 'v%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}], | ||
| 'checksums': ['6b44ba8a89921b3843a5f9fc41dc4f8a0c784ba12221e3ea0fb8c1b01a10cf2e'], | ||
| }), | ||
| (name, version, { | ||
| 'modulename': 'openff.toolkit', | ||
| 'source_urls': ['https://github.com/openforcefield/openff-toolkit/archive/'], | ||
| 'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}], | ||
| 'checksums': ['70a81e914e86efd933819a5db05fc4400dcd23e12ad29398fdad46f2765b5634'], | ||
| }), | ||
| ] | ||
|
|
||
| sanity_check_commands = [ | ||
| "python -c 'from openff.toolkit import Molecule, Topology, ForceField'", | ||
| "python -c 'from openff.interchange import Interchange'", | ||
| "python -c 'from openff.units import unit'", | ||
| "python -c 'from openff.interchange.components.mdconfig import MDConfig'", | ||
| "python -c 'from openff.interchange.models import TopologyKey'", | ||
| "python -c 'from openff.toolkit.typing.engines.smirnoff import ForceField'", | ||
| ] | ||
|
|
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| sanity_pip_check = True | ||
|
|
||
| moduleclass = 'bio' | ||
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